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TRIM8 (tripartite motif containing 8)

Identity

Alias_namesRNF27
ring finger protein 27
tripartite motif-containing 8
Alias_symbol (synonym)GERP
Other alias
HGNC (Hugo) TRIM8
LocusID (NCBI) 81603
Atlas_Id 42704
Location 10q24.32  [Link to chromosome band 10q24]
Location_base_pair Starts at 102644495 and ends at 102658319 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FKBP2 (11q13.1) / TRIM8 (10q24.32)HSPBP1 (19q13.42) / TRIM8 (10q24.32)WBP1L (10q24.32) / TRIM8 (10q24.32)
C10orf26 TRIM8 10q24.32

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]

Solid Tumors TT_t1010q24q24ID100269


External links

Nomenclature
HGNC (Hugo)TRIM8   15579
Cards
Entrez_Gene (NCBI)TRIM8  81603  tripartite motif containing 8
AliasesGERP; RNF27
GeneCards (Weizmann)TRIM8
Ensembl hg19 (Hinxton)ENSG00000171206 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171206 [Gene_View]  ENSG00000171206 [Sequence]  chr10:102644495-102658319 [Contig_View]  TRIM8 [Vega]
ICGC DataPortalENSG00000171206
TCGA cBioPortalTRIM8
AceView (NCBI)TRIM8
Genatlas (Paris)TRIM8
WikiGenes81603
SOURCE (Princeton)TRIM8
Genetics Home Reference (NIH)TRIM8
Genomic and cartography
GoldenPath hg38 (UCSC)TRIM8  -     chr10:102644495-102658319 +  10q24.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRIM8  -     10q24.32   [Description]    (hg19-Feb_2009)
GoldenPathTRIM8 - 10q24.32 [CytoView hg19]  TRIM8 - 10q24.32 [CytoView hg38]
ImmunoBaseENSG00000171206
Mapping of homologs : NCBITRIM8 [Mapview hg19]  TRIM8 [Mapview hg38]
OMIM606125   
Gene and transcription
Genbank (Entrez)AA907931 AF086326 AF220034 AF281046 AL360160
RefSeq transcript (Entrez)NM_001345950 NM_030912
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TRIM8
Alternative Splicing GalleryENSG00000171206
Gene ExpressionTRIM8 [ NCBI-GEO ]   TRIM8 [ EBI - ARRAY_EXPRESS ]   TRIM8 [ SEEK ]   TRIM8 [ MEM ]
Gene Expression Viewer (FireBrowse)TRIM8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)81603
GTEX Portal (Tissue expression)TRIM8
Human Protein AtlasENSG00000171206-TRIM8 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRIM8
DMDM Disease mutations81603
Blocks (Seattle)TRIM8
Human Protein Atlas [tissue]ENSG00000171206-TRIM8 [tissue]
HPRD06934
IPIIPI00289207   
Protein Interaction databases
FunCoupENSG00000171206
BioGRIDTRIM8
STRING (EMBL)TRIM8
ZODIACTRIM8
Ontologies - Pathways
Huge Navigator TRIM8 [HugePedia]
snp3D : Map Gene to Disease81603
BioCentury BCIQTRIM8
ClinGenTRIM8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD81603
Chemical/Pharm GKB GenePA37983
Clinical trialTRIM8
Miscellaneous
canSAR (ICR)TRIM8 (select the gene name)
DataMed IndexTRIM8
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRIM8
EVEXTRIM8
GoPubMedTRIM8
iHOPTRIM8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Feb 19 17:14:26 CET 2020

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