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TRIOBP (TRIO and F-actin binding protein)

Identity

Alias (NCBI)DFNB28
HRIHFB2122
TAP68
TARA
dJ37E16.4
HGNC (Hugo) TRIOBP
HGNC Alias symbHRIHFB2122
KIAA1662
Tara
TAP68
HGNC Previous nameDFNB28
LocusID (NCBI) 11078
Atlas_Id 55136
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 37746234 and ends at 37759956 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AGAP1 (2q37.2) / TRIOBP (22q13.1)GGA1 (22q13.1) / TRIOBP (22q13.1)SH2B3 (12q24.12) / TRIOBP (22q13.1)
SIK3 (11q23.3) / TRIOBP (22q13.1)SYNGR2 (17q25.3) / TRIOBP (22q13.1)SYNPO (5q33.1) / TRIOBP (22q13.1)
TRIOBP (22q13.1) / LGALS1 (22q13.1)TRIOBP (22q13.1) / NDE1 (16p13.11)TRIOBP (22q13.1) / SLCO3A1 (15q26.1)
TRIOBP (22q13.1) / UNC13C (15q21.3)TRIOBP 22q13.1 / UNC13C 15q21.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TRIOBP   17009
Cards
Entrez_Gene (NCBI)TRIOBP    TRIO and F-actin binding protein
AliasesDFNB28; HRIHFB2122; TAP68; TARA; 
dJ37E16.4
GeneCards (Weizmann)TRIOBP
Ensembl hg19 (Hinxton)ENSG00000100106 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000100106 [Gene_View]  ENSG00000100106 [Sequence]  chr22:37746234-37759956 [Contig_View]  TRIOBP [Vega]
ICGC DataPortalENSG00000100106
TCGA cBioPortalTRIOBP
AceView (NCBI)TRIOBP
Genatlas (Paris)TRIOBP
SOURCE (Princeton)TRIOBP
Genetics Home Reference (NIH)TRIOBP
Genomic and cartography
GoldenPath hg38 (UCSC)TRIOBP  -     chr22:37746234-37759956 +  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRIOBP  -     22q13.1   [Description]    (hg19-Feb_2009)
GoldenPathTRIOBP - 22q13.1 [CytoView hg19]  TRIOBP - 22q13.1 [CytoView hg38]
ImmunoBaseENSG00000100106
Genome Data Viewer NCBITRIOBP [Mapview hg19]  
OMIM609761   609823   
Gene and transcription
Genbank (Entrez)AB015343 AF281030 AK096634 AL713698 AW444985
RefSeq transcript (Entrez)NM_001039141 NM_007032 NM_138632
Consensus coding sequences : CCDS (NCBI)TRIOBP
Gene ExpressionTRIOBP [ NCBI-GEO ]   TRIOBP [ EBI - ARRAY_EXPRESS ]   TRIOBP [ SEEK ]   TRIOBP [ MEM ]
Gene Expression Viewer (FireBrowse)TRIOBP [ Firebrowse - Broad ]
GenevisibleExpression of TRIOBP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11078
GTEX Portal (Tissue expression)TRIOBP
Human Protein AtlasENSG00000100106-TRIOBP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRIOBP
Human Protein Atlas [tissue]ENSG00000100106-TRIOBP [tissue]
HPRD11028
Protein Interaction databases
BioGRIDTRIOBP
STRING (EMBL)TRIOBP
ZODIACTRIOBP
Ontologies - Pathways
Litterature
PubMed62 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTRIOBP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:36:26 CEST 2021

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