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TRPC2 (transient receptor potential cation channel subfamily C member 2 (pseudogene))

Identity

Alias (NCBI)-
HGNC (Hugo) TRPC2
HGNC Previous nametransient receptor potential cation channel, subfamily C, member 2
 transient receptor potential cation channel, subfamily C, member 2, pseudogene
LocusID (NCBI) 7221
Atlas_Id 75208
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 3626460 and ends at 3637559 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TRPC2   12334
Cards
Entrez_Gene (NCBI)TRPC2    transient receptor potential cation channel subfamily C member 2 (pseudogene)
Aliases
GeneCards (Weizmann)TRPC2
Ensembl hg19 (Hinxton)ENSG00000182048 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182048 [Gene_View]  ENSG00000182048 [Sequence]  chr11:3626460-3637559 [Contig_View]  TRPC2 [Vega]
ICGC DataPortalENSG00000182048
TCGA cBioPortalTRPC2
AceView (NCBI)TRPC2
Genatlas (Paris)TRPC2
SOURCE (Princeton)TRPC2
Genetics Home Reference (NIH)TRPC2
Genomic and cartography
GoldenPath hg38 (UCSC)TRPC2  -     chr11:3626460-3637559 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRPC2  -     11p15.4   [Description]    (hg19-Feb_2009)
GoldenPathTRPC2 - 11p15.4 [CytoView hg19]  TRPC2 - 11p15.4 [CytoView hg38]
ImmunoBaseENSG00000182048
Genome Data Viewer NCBITRPC2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA423920 AB231779 X89067
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TRPC2
Gene ExpressionTRPC2 [ NCBI-GEO ]   TRPC2 [ EBI - ARRAY_EXPRESS ]   TRPC2 [ SEEK ]   TRPC2 [ MEM ]
Gene Expression Viewer (FireBrowse)TRPC2 [ Firebrowse - Broad ]
GenevisibleExpression of TRPC2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7221
GTEX Portal (Tissue expression)TRPC2
Human Protein AtlasENSG00000182048-TRPC2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRPC2
Human Protein Atlas [tissue]ENSG00000182048-TRPC2 [tissue]
Protein Interaction databases
BioGRIDTRPC2
STRING (EMBL)TRPC2
ZODIACTRPC2
Ontologies - Pathways
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTRPC2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:27:04 CEST 2021

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