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TSACC (TSSK6 activating cochaperone)

Identity

Alias_namesC1orf182
chromosome 1 open reading frame 182
Alias_symbol (synonym)SSTK-IP
SIP
Other alias
HGNC (Hugo) TSACC
LocusID (NCBI) 128229
Atlas_Id 75218
Location 1q22  [Link to chromosome band 1q22]
Location_base_pair Starts at 156338440 and ends at 156346994 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TSACC   30636
Cards
Entrez_Gene (NCBI)TSACC  128229  TSSK6 activating cochaperone
AliasesC1orf182; SIP; SSTK-IP
GeneCards (Weizmann)TSACC
Ensembl hg19 (Hinxton)ENSG00000163467 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163467 [Gene_View]  chr1:156338440-156346994 [Contig_View]  TSACC [Vega]
ICGC DataPortalENSG00000163467
TCGA cBioPortalTSACC
AceView (NCBI)TSACC
Genatlas (Paris)TSACC
WikiGenes128229
SOURCE (Princeton)TSACC
Genetics Home Reference (NIH)TSACC
Genomic and cartography
GoldenPath hg38 (UCSC)TSACC  -     chr1:156338440-156346994 +  1q22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TSACC  -     1q22   [Description]    (hg19-Feb_2009)
EnsemblTSACC - 1q22 [CytoView hg19]  TSACC - 1q22 [CytoView hg38]
Mapping of homologs : NCBITSACC [Mapview hg19]  TSACC [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI336861 AK311950 AY048672 AY048673 BC014605
RefSeq transcript (Entrez)NM_001304817 NM_001304818 NM_001304819 NM_001304820 NM_001304821 NM_001304822 NM_001304823 NM_001304824 NM_001304825 NM_001304826 NM_144627
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TSACC
Cluster EST : UnigeneHs.534539 [ NCBI ]
CGAP (NCI)Hs.534539
Alternative Splicing GalleryENSG00000163467
Gene ExpressionTSACC [ NCBI-GEO ]   TSACC [ EBI - ARRAY_EXPRESS ]   TSACC [ SEEK ]   TSACC [ MEM ]
Gene Expression Viewer (FireBrowse)TSACC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)128229
GTEX Portal (Tissue expression)TSACC
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96A04   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96A04  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96A04
Splice isoforms : SwissVarQ96A04
PhosPhoSitePlusQ96A04
Domains : Interpro (EBI)SSTK-IP   
Domain families : Pfam (Sanger)SSTK-IP (PF15836)   
Domain families : Pfam (NCBI)pfam15836   
Conserved Domain (NCBI)TSACC
DMDM Disease mutations128229
Blocks (Seattle)TSACC
SuperfamilyQ96A04
Human Protein AtlasENSG00000163467
Peptide AtlasQ96A04
HPRD10252
IPIIPI00059138   
Protein Interaction databases
DIP (DOE-UCLA)Q96A04
IntAct (EBI)Q96A04
FunCoupENSG00000163467
BioGRIDTSACC
STRING (EMBL)TSACC
ZODIACTSACC
Ontologies - Pathways
QuickGOQ96A04
Ontology : AmiGOprotein binding  cytoplasm  chaperone binding  
Ontology : EGO-EBIprotein binding  cytoplasm  chaperone binding  
NDEx NetworkTSACC
Atlas of Cancer Signalling NetworkTSACC
Wikipedia pathwaysTSACC
Orthology - Evolution
OrthoDB128229
GeneTree (enSembl)ENSG00000163467
Phylogenetic Trees/Animal Genes : TreeFamTSACC
HOVERGENQ96A04
HOGENOMQ96A04
Homologs : HomoloGeneTSACC
Homology/Alignments : Family Browser (UCSC)TSACC
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTSACC [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TSACC
dbVarTSACC
ClinVarTSACC
1000_GenomesTSACC 
Exome Variant ServerTSACC
ExAC (Exome Aggregation Consortium)TSACC (select the gene name)
Genetic variants : HAPMAP128229
Genomic Variants (DGV)TSACC [DGVbeta]
DECIPHERTSACC [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTSACC 
Mutations
ICGC Data PortalTSACC 
TCGA Data PortalTSACC 
Broad Tumor PortalTSACC
OASIS PortalTSACC [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTSACC
BioMutasearch TSACC
DgiDB (Drug Gene Interaction Database)TSACC
DoCM (Curated mutations)TSACC (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TSACC (select a term)
intoGenTSACC
Cancer3DTSACC(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTSACC
Genetic Testing Registry TSACC
NextProtQ96A04 [Medical]
TSGene128229
GENETestsTSACC
Target ValidationTSACC
Huge Navigator TSACC [HugePedia]
snp3D : Map Gene to Disease128229
BioCentury BCIQTSACC
ClinGenTSACC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD128229
Chemical/Pharm GKB GenePA142672430
Clinical trialTSACC
Miscellaneous
canSAR (ICR)TSACC (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTSACC
EVEXTSACC
GoPubMedTSACC
iHOPTSACC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:47:19 CEST 2017

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