Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TSC22D1-AS1 (TSC22D1 antisense RNA 1)

Identity

Alias_namesTSC22D1 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) TSC22D1-AS1
LocusID (NCBI) 641467
Atlas_Id 75219
Location 13q14.11  [Link to chromosome band 13q14]
Location_base_pair Starts at 45150032 and ends at 45154568 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TSC22D1-AS1   43684
Cards
Entrez_Gene (NCBI)TSC22D1-AS1  641467  TSC22D1 antisense RNA 1
Aliases
GeneCards (Weizmann)TSC22D1-AS1
Ensembl hg19 (Hinxton)ENSG00000278156 [Gene_View]  chr13:45150032-45154568 [Contig_View]  TSC22D1-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000278156 [Gene_View]  chr13:45150032-45154568 [Contig_View]  TSC22D1-AS1 [Vega]
ICGC DataPortalENSG00000278156
TCGA cBioPortalTSC22D1-AS1
AceView (NCBI)TSC22D1-AS1
Genatlas (Paris)TSC22D1-AS1
WikiGenes641467
SOURCE (Princeton)TSC22D1-AS1
Genetics Home Reference (NIH)TSC22D1-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)TSC22D1-AS1  -     chr13:45150032-45154568 +  13q14.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TSC22D1-AS1  -     13q14.11   [Description]    (hg38-Dec_2013)
EnsemblTSC22D1-AS1 - 13q14.11 [CytoView hg19]  TSC22D1-AS1 - 13q14.11 [CytoView hg38]
Mapping of homologs : NCBITSC22D1-AS1 [Mapview hg19]  TSC22D1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC036219 BC040675 LK938507 LK938508
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000013 NC_018924 NG_029852 NT_024524 NW_004929388
Consensus coding sequences : CCDS (NCBI)TSC22D1-AS1
Cluster EST : UnigeneHs.624196 [ NCBI ]
CGAP (NCI)Hs.624196
Alternative Splicing GalleryENSG00000278156
Gene ExpressionTSC22D1-AS1 [ NCBI-GEO ]   TSC22D1-AS1 [ EBI - ARRAY_EXPRESS ]   TSC22D1-AS1 [ SEEK ]   TSC22D1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TSC22D1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)641467
GTEX Portal (Tissue expression)TSC22D1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TSC22D1-AS1
DMDM Disease mutations641467
Blocks (Seattle)TSC22D1-AS1
Human Protein AtlasENSG00000278156
IPIIPI00743667   
Protein Interaction databases
FunCoupENSG00000278156
BioGRIDTSC22D1-AS1
STRING (EMBL)TSC22D1-AS1
ZODIACTSC22D1-AS1
Ontologies - Pathways
Huge Navigator TSC22D1-AS1 [HugePedia]
snp3D : Map Gene to Disease641467
BioCentury BCIQTSC22D1-AS1
ClinGenTSC22D1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD641467
Clinical trialTSC22D1-AS1
Miscellaneous
canSAR (ICR)TSC22D1-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTSC22D1-AS1
EVEXTSC22D1-AS1
GoPubMedTSC22D1-AS1
iHOPTSC22D1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:49:55 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.