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TSC22D3 (TSC22 domain family member 3)

Identity

Alias (NCBI)DIP
DSIPI
GILZ
TSC-22R
HGNC (Hugo) TSC22D3
HGNC Alias symbDIP
GILZ
TSC-22R
hDIP
HGNC Alias nameglucocorticoid-induced leucine zipper
HGNC Previous nameDSIPI
HGNC Previous namedelta sleep inducing peptide, immunoreactor
 TSC22 domain family, member 3
LocusID (NCBI) 1831
Atlas_Id 51354
Location Xq22.3  [Link to chromosome band Xq22]
Location_base_pair Starts at 107713222 and ends at 107775787 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CXCR4 (2q22.1) / TSC22D3 (Xq22.3)PTRF (17q21.2) / TSC22D3 (Xq22.3)TSC22D3 (Xq22.3) / AP3M1 (10q22.2)
TSC22D3 (Xq22.3) / GRIK5 (19q13.2)TSC22D3 (Xq22.3) / KIAA1324 (1p13.3)TSC22D3 (Xq22.3) / RHOBTB2 (8p21.3)
TSC22D3 (Xq22.3) / TM9SF3 (10q24.1)TSC22D3 (Xq22.3) / TSC22D3 (Xq22.3)TSC22D3 Xq22.3 / AP3M1 10q22.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TSC22D3   3051
Cards
Entrez_Gene (NCBI)TSC22D3    TSC22 domain family member 3
AliasesDIP; DSIPI; GILZ; TSC-22R
GeneCards (Weizmann)TSC22D3
Ensembl hg19 (Hinxton)ENSG00000157514 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000157514 [Gene_View]  ENSG00000157514 [Sequence]  chrX:107713222-107775787 [Contig_View]  TSC22D3 [Vega]
ICGC DataPortalENSG00000157514
TCGA cBioPortalTSC22D3
AceView (NCBI)TSC22D3
Genatlas (Paris)TSC22D3
SOURCE (Princeton)TSC22D3
Genetics Home Reference (NIH)TSC22D3
Genomic and cartography
GoldenPath hg38 (UCSC)TSC22D3  -     chrX:107713222-107775787 -  Xq22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TSC22D3  -     Xq22.3   [Description]    (hg19-Feb_2009)
GoldenPathTSC22D3 - Xq22.3 [CytoView hg19]  TSC22D3 - Xq22.3 [CytoView hg38]
ImmunoBaseENSG00000157514
Genome Data Viewer NCBITSC22D3 [Mapview hg19]  
OMIM300506   
Gene and transcription
Genbank (Entrez)AB025432 AF153603 AF183393 AF228339 AK092645
RefSeq transcript (Entrez)NM_001015881 NM_001318468 NM_001318470 NM_004089 NM_198057
Consensus coding sequences : CCDS (NCBI)TSC22D3
Gene ExpressionTSC22D3 [ NCBI-GEO ]   TSC22D3 [ EBI - ARRAY_EXPRESS ]   TSC22D3 [ SEEK ]   TSC22D3 [ MEM ]
Gene Expression Viewer (FireBrowse)TSC22D3 [ Firebrowse - Broad ]
GenevisibleExpression of TSC22D3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1831
GTEX Portal (Tissue expression)TSC22D3
Human Protein AtlasENSG00000157514-TSC22D3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ99576   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ99576  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ99576
PhosPhoSitePlusQ99576
Domaine pattern : Prosite (Expaxy)TSC22 (PS01289)   
Domains : Interpro (EBI)TSC-22_Dip_Bun   
Domain families : Pfam (Sanger)TSC22 (PF01166)   
Domain families : Pfam (NCBI)pfam01166   
Conserved Domain (NCBI)TSC22D3
SuperfamilyQ99576
AlphaFold pdb e-kbQ99576   
Human Protein Atlas [tissue]ENSG00000157514-TSC22D3 [tissue]
HPRD04266
Protein Interaction databases
DIP (DOE-UCLA)Q99576
IntAct (EBI)Q99576
BioGRIDTSC22D3
STRING (EMBL)TSC22D3
ZODIACTSC22D3
Ontologies - Pathways
QuickGOQ99576
Ontology : AmiGOprotein binding  nucleus  cytosol  regulation of transcription by RNA polymerase II  response to osmotic stress  ion transmembrane transport  negative regulation of activation-induced cell death of T cells  
Ontology : EGO-EBIprotein binding  nucleus  cytosol  regulation of transcription by RNA polymerase II  response to osmotic stress  ion transmembrane transport  negative regulation of activation-induced cell death of T cells  
NDEx NetworkTSC22D3
Atlas of Cancer Signalling NetworkTSC22D3
Wikipedia pathwaysTSC22D3
Orthology - Evolution
OrthoDB1831
GeneTree (enSembl)ENSG00000157514
Phylogenetic Trees/Animal Genes : TreeFamTSC22D3
Homologs : HomoloGeneTSC22D3
Homology/Alignments : Family Browser (UCSC)TSC22D3
Gene fusions - Rearrangements
Fusion : MitelmanTSC22D3/AP3M1 [Xq22.3/10q22.2]  
Fusion : QuiverTSC22D3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTSC22D3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TSC22D3
dbVarTSC22D3
ClinVarTSC22D3
MonarchTSC22D3
1000_GenomesTSC22D3 
Exome Variant ServerTSC22D3
GNOMAD BrowserENSG00000157514
Varsome BrowserTSC22D3
ACMGTSC22D3 variants
VarityQ99576
Genomic Variants (DGV)TSC22D3 [DGVbeta]
DECIPHERTSC22D3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTSC22D3 
Mutations
ICGC Data PortalTSC22D3 
TCGA Data PortalTSC22D3 
Broad Tumor PortalTSC22D3
OASIS PortalTSC22D3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTSC22D3  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTSC22D3
Mutations and Diseases : HGMDTSC22D3
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTSC22D3
DgiDB (Drug Gene Interaction Database)TSC22D3
DoCM (Curated mutations)TSC22D3
CIViC (Clinical Interpretations of Variants in Cancer)TSC22D3
Cancer3DTSC22D3
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300506   
Orphanet
DisGeNETTSC22D3
MedgenTSC22D3
Genetic Testing Registry TSC22D3
NextProtQ99576 [Medical]
GENETestsTSC22D3
Target ValidationTSC22D3
Huge Navigator TSC22D3 [HugePedia]
ClinGenTSC22D3
Clinical trials, drugs, therapy
MyCancerGenomeTSC22D3
Protein Interactions : CTDTSC22D3
Pharm GKB GenePA27504
PharosQ99576
Clinical trialTSC22D3
Miscellaneous
canSAR (ICR)TSC22D3
HarmonizomeTSC22D3
DataMed IndexTSC22D3
Probes
Litterature
PubMed79 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTSC22D3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:36:34 CEST 2021

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