Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TSG1 (tumor suppressor TSG1)

Identity

Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 643432
Atlas_Id 43572
Location 6q16.1  [Link to chromosome band 6q16]
Location_base_pair Starts at 93718303 and ends at 93746758 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)TSG1    tumor suppressor TSG1
Aliases
GeneCards (Weizmann)TSG1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:93718303-93746758 [Contig_View]  TSG1 [Vega]
TCGA cBioPortalTSG1
AceView (NCBI)TSG1
Genatlas (Paris)TSG1
SOURCE (Princeton)TSG1
Genetics Home Reference (NIH)TSG1
Genomic and cartography
GoldenPath hg38 (UCSC)TSG1  -     chr6:93718303-93746758 +  6q16.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TSG1  -     6q16.1   [Description]    (hg19-Feb_2009)
GoldenPathTSG1 - 6q16.1 [CytoView hg19]  TSG1 - 6q16.1 [CytoView hg38]
Genome Data Viewer NCBITSG1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AY314745 AY314746 AY314747 AY314748 AY314749
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TSG1
Gene ExpressionTSG1 [ NCBI-GEO ]   TSG1 [ EBI - ARRAY_EXPRESS ]   TSG1 [ SEEK ]   TSG1 [ MEM ]
Gene Expression Viewer (FireBrowse)TSG1 [ Firebrowse - Broad ]
GenevisibleExpression of TSG1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)643432
GTEX Portal (Tissue expression)TSG1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TSG1
Protein Interaction databases
BioGRIDTSG1
STRING (EMBL)TSG1
ZODIACTSG1
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTSG1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:36:35 CEST 2021

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