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TSKS (testis specific serine kinase substrate)

Identity

Alias (NCBI)PPP1R161
STK22S1
TSKS1
TSSKS
HGNC (Hugo) TSKS
HGNC Alias symbTSSKS
PPP1R161
HGNC Alias nameprotein phosphatase 1, regulatory subunit 161
LocusID (NCBI) 60385
Atlas_Id 42714
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 49739760 and ends at 49763306 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TSKS   30719
Cards
Entrez_Gene (NCBI)TSKS    testis specific serine kinase substrate
AliasesPPP1R161; STK22S1; TSKS1; TSSKS
GeneCards (Weizmann)TSKS
Ensembl hg19 (Hinxton)ENSG00000126467 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000126467 [Gene_View]  ENSG00000126467 [Sequence]  chr19:49739760-49763306 [Contig_View]  TSKS [Vega]
ICGC DataPortalENSG00000126467
TCGA cBioPortalTSKS
AceView (NCBI)TSKS
Genatlas (Paris)TSKS
SOURCE (Princeton)TSKS
Genetics Home Reference (NIH)TSKS
Genomic and cartography
GoldenPath hg38 (UCSC)TSKS  -     chr19:49739760-49763306 -  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TSKS  -     19q13.33   [Description]    (hg19-Feb_2009)
GoldenPathTSKS - 19q13.33 [CytoView hg19]  TSKS - 19q13.33 [CytoView hg38]
ImmunoBaseENSG00000126467
Genome Data Viewer NCBITSKS [Mapview hg19]  
OMIM608253   
Gene and transcription
Genbank (Entrez)AF411384 BC058862
RefSeq transcript (Entrez)NM_021733
Consensus coding sequences : CCDS (NCBI)TSKS
Gene ExpressionTSKS [ NCBI-GEO ]   TSKS [ EBI - ARRAY_EXPRESS ]   TSKS [ SEEK ]   TSKS [ MEM ]
Gene Expression Viewer (FireBrowse)TSKS [ Firebrowse - Broad ]
GenevisibleExpression of TSKS in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)60385
GTEX Portal (Tissue expression)TSKS
Human Protein AtlasENSG00000126467-TSKS [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UJT2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UJT2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UJT2
PhosPhoSitePlusQ9UJT2
Domains : Interpro (EBI)TSKS   
Domain families : Pfam (Sanger)TSKS (PF15358)   
Domain families : Pfam (NCBI)pfam15358   
Conserved Domain (NCBI)TSKS
SuperfamilyQ9UJT2
AlphaFold pdb e-kbQ9UJT2   
Human Protein Atlas [tissue]ENSG00000126467-TSKS [tissue]
HPRD09748
Protein Interaction databases
DIP (DOE-UCLA)Q9UJT2
IntAct (EBI)Q9UJT2
BioGRIDTSKS
STRING (EMBL)TSKS
ZODIACTSKS
Ontologies - Pathways
QuickGOQ9UJT2
Ontology : AmiGOprotein binding  cytoplasm  centriole  centriole  protein kinase binding  protein kinase binding  
Ontology : EGO-EBIprotein binding  cytoplasm  centriole  centriole  protein kinase binding  protein kinase binding  
NDEx NetworkTSKS
Atlas of Cancer Signalling NetworkTSKS
Wikipedia pathwaysTSKS
Orthology - Evolution
OrthoDB60385
GeneTree (enSembl)ENSG00000126467
Phylogenetic Trees/Animal Genes : TreeFamTSKS
Homologs : HomoloGeneTSKS
Homology/Alignments : Family Browser (UCSC)TSKS
Gene fusions - Rearrangements
Fusion : QuiverTSKS
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTSKS [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TSKS
dbVarTSKS
ClinVarTSKS
MonarchTSKS
1000_GenomesTSKS 
Exome Variant ServerTSKS
GNOMAD BrowserENSG00000126467
Varsome BrowserTSKS
ACMGTSKS variants
VarityQ9UJT2
Genomic Variants (DGV)TSKS [DGVbeta]
DECIPHERTSKS [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTSKS 
Mutations
ICGC Data PortalTSKS 
TCGA Data PortalTSKS 
Broad Tumor PortalTSKS
OASIS PortalTSKS [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTSKS  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTSKS
Mutations and Diseases : HGMDTSKS
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTSKS
DgiDB (Drug Gene Interaction Database)TSKS
DoCM (Curated mutations)TSKS
CIViC (Clinical Interpretations of Variants in Cancer)TSKS
Cancer3DTSKS
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608253   
Orphanet
DisGeNETTSKS
MedgenTSKS
Genetic Testing Registry TSKS
NextProtQ9UJT2 [Medical]
GENETestsTSKS
Target ValidationTSKS
Huge Navigator TSKS [HugePedia]
ClinGenTSKS
Clinical trials, drugs, therapy
MyCancerGenomeTSKS
Protein Interactions : CTDTSKS
Pharm GKB GenePA164727339
PharosQ9UJT2
Clinical trialTSKS
Miscellaneous
canSAR (ICR)TSKS
HarmonizomeTSKS
DataMed IndexTSKS
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTSKS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:36:36 CEST 2021

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