Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TSPOAP1-AS1 (TSPOAP1 antisense RNA 1)

Identity

Alias_namesBZRAP1-AS1
BZRAP1 antisense RNA 1 (non-protein coding)
Other alias
HGNC (Hugo) TSPOAP1-AS1
LocusID (NCBI) 100506779
Atlas_Id 78521
Location 17q22  [Link to chromosome band 17q22]
Location_base_pair Starts at 56402811 and ends at 56431088 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TSPOAP1-AS1   44148
Cards
Entrez_Gene (NCBI)TSPOAP1-AS1  100506779  TSPOAP1 antisense RNA 1
AliasesBZRAP1-AS1
GeneCards (Weizmann)TSPOAP1-AS1
Ensembl hg19 (Hinxton)ENSG00000265148 [Gene_View]  chr17:56402811-56431088 [Contig_View]  TSPOAP1-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000265148 [Gene_View]  chr17:56402811-56431088 [Contig_View]  TSPOAP1-AS1 [Vega]
ICGC DataPortalENSG00000265148
TCGA cBioPortalTSPOAP1-AS1
AceView (NCBI)TSPOAP1-AS1
Genatlas (Paris)TSPOAP1-AS1
WikiGenes100506779
SOURCE (Princeton)TSPOAP1-AS1
Genetics Home Reference (NIH)TSPOAP1-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)TSPOAP1-AS1  -     chr17:56402811-56431088 +  17q22   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TSPOAP1-AS1  -     17q22   [Description]    (hg38-Dec_2013)
EnsemblTSPOAP1-AS1 - 17q22 [CytoView hg19]  TSPOAP1-AS1 - 17q22 [CytoView hg38]
Mapping of homologs : NCBITSPOAP1-AS1 [Mapview hg19]  TSPOAP1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TSPOAP1-AS1
Cluster EST : UnigeneHs.718477 [ NCBI ]
CGAP (NCI)Hs.718477
Alternative Splicing GalleryENSG00000265148
Gene ExpressionTSPOAP1-AS1 [ NCBI-GEO ]   TSPOAP1-AS1 [ EBI - ARRAY_EXPRESS ]   TSPOAP1-AS1 [ SEEK ]   TSPOAP1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TSPOAP1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506779
GTEX Portal (Tissue expression)TSPOAP1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TSPOAP1-AS1
DMDM Disease mutations100506779
Blocks (Seattle)TSPOAP1-AS1
Human Protein AtlasENSG00000265148
Protein Interaction databases
FunCoupENSG00000265148
BioGRIDTSPOAP1-AS1
STRING (EMBL)TSPOAP1-AS1
ZODIACTSPOAP1-AS1
Ontologies - Pathways
Huge Navigator TSPOAP1-AS1 [HugePedia]
snp3D : Map Gene to Disease100506779
BioCentury BCIQTSPOAP1-AS1
ClinGenTSPOAP1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506779
Clinical trialTSPOAP1-AS1
Miscellaneous
canSAR (ICR)TSPOAP1-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTSPOAP1-AS1
EVEXTSPOAP1-AS1
GoPubMedTSPOAP1-AS1
iHOPTSPOAP1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:50:00 CET 2017

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