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TSPOAP1 (TSPO associated protein 1)

Identity

Alias_namesBZRAP1
benzodiazepine receptor (peripheral) associated protein 1
Alias_symbol (synonym)PRAX-1
KIAA0612
RIM-BP1
RIMBP1
Other aliasPBR-IP
PRAX1
HGNC (Hugo) TSPOAP1
LocusID (NCBI) 9256
Atlas_Id 78578
Location 17q22  [Link to chromosome band 17q22]
Location_base_pair Starts at 56378588 and ends at 56406152 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TSPOAP1   16831
Cards
Entrez_Gene (NCBI)TSPOAP1  9256  TSPO associated protein 1
AliasesBZRAP1; PBR-IP; PRAX-1; PRAX1; 
RIM-BP1; RIMBP1
GeneCards (Weizmann)TSPOAP1
Ensembl hg19 (Hinxton)ENSG00000005379 [Gene_View]  chr17:56378588-56406152 [Contig_View]  TSPOAP1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000005379 [Gene_View]  chr17:56378588-56406152 [Contig_View]  TSPOAP1 [Vega]
ICGC DataPortalENSG00000005379
TCGA cBioPortalTSPOAP1
AceView (NCBI)TSPOAP1
Genatlas (Paris)TSPOAP1
WikiGenes9256
SOURCE (Princeton)TSPOAP1
Genetics Home Reference (NIH)TSPOAP1
Genomic and cartography
GoldenPath hg19 (UCSC)TSPOAP1  -     chr17:56378588-56406152 -  17q22   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TSPOAP1  -     17q22   [Description]    (hg38-Dec_2013)
EnsemblTSPOAP1 - 17q22 [CytoView hg19]  TSPOAP1 - 17q22 [CytoView hg38]
Mapping of homologs : NCBITSPOAP1 [Mapview hg19]  TSPOAP1 [Mapview hg38]
OMIM610764   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001261835 NM_004758 NM_024418
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TSPOAP1
Cluster EST : UnigeneHs.112499 [ NCBI ]
CGAP (NCI)Hs.112499
Alternative Splicing GalleryENSG00000005379
Gene ExpressionTSPOAP1 [ NCBI-GEO ]   TSPOAP1 [ EBI - ARRAY_EXPRESS ]   TSPOAP1 [ SEEK ]   TSPOAP1 [ MEM ]
Gene Expression Viewer (FireBrowse)TSPOAP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)9256
GTEX Portal (Tissue expression)TSPOAP1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TSPOAP1
DMDM Disease mutations9256
Blocks (Seattle)TSPOAP1
Human Protein AtlasENSG00000005379
HPRD09832
IPIIPI00006254   IPI00397514   IPI00397515   
Protein Interaction databases
FunCoupENSG00000005379
BioGRIDTSPOAP1
STRING (EMBL)TSPOAP1
ZODIACTSPOAP1
Ontologies - Pathways
Huge Navigator TSPOAP1 [HugePedia]
snp3D : Map Gene to Disease9256
BioCentury BCIQTSPOAP1
ClinGenTSPOAP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9256
Chemical/Pharm GKB GenePA128394545
Clinical trialTSPOAP1
Miscellaneous
canSAR (ICR)TSPOAP1 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTSPOAP1
EVEXTSPOAP1
GoPubMedTSPOAP1
iHOPTSPOAP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:50:00 CET 2017

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