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TSPYL5 (TSPY like 5)

Identity

Alias (NCBI)-
HGNC (Hugo) TSPYL5
HGNC Alias symbKIAA1750
HGNC Alias nameTestis-specific Y-encoded-like protein 5
LocusID (NCBI) 85453
Atlas_Id 50228
Location 8q22.1  [Link to chromosome band 8q22]
Location_base_pair Starts at 97273488 and ends at 97277928 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TSPYL5 (8q22.1) / TSPYL5 (8q22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TSPYL5   29367
Cards
Entrez_Gene (NCBI)TSPYL5    TSPY like 5
Aliases
GeneCards (Weizmann)TSPYL5
Ensembl hg19 (Hinxton)ENSG00000180543 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180543 [Gene_View]  ENSG00000180543 [Sequence]  chr8:97273488-97277928 [Contig_View]  TSPYL5 [Vega]
ICGC DataPortalENSG00000180543
TCGA cBioPortalTSPYL5
AceView (NCBI)TSPYL5
Genatlas (Paris)TSPYL5
SOURCE (Princeton)TSPYL5
Genetics Home Reference (NIH)TSPYL5
Genomic and cartography
GoldenPath hg38 (UCSC)TSPYL5  -     chr8:97273488-97277928 -  8q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TSPYL5  -     8q22.1   [Description]    (hg19-Feb_2009)
GoldenPathTSPYL5 - 8q22.1 [CytoView hg19]  TSPYL5 - 8q22.1 [CytoView hg38]
ImmunoBaseENSG00000180543
Genome Data Viewer NCBITSPYL5 [Mapview hg19]  
OMIM614721   
Gene and transcription
Genbank (Entrez)AB051537 AK091445 AK092272 AL080059 BC045630
RefSeq transcript (Entrez)NM_033512
Consensus coding sequences : CCDS (NCBI)TSPYL5
Gene ExpressionTSPYL5 [ NCBI-GEO ]   TSPYL5 [ EBI - ARRAY_EXPRESS ]   TSPYL5 [ SEEK ]   TSPYL5 [ MEM ]
Gene Expression Viewer (FireBrowse)TSPYL5 [ Firebrowse - Broad ]
GenevisibleExpression of TSPYL5 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85453
GTEX Portal (Tissue expression)TSPYL5
Human Protein AtlasENSG00000180543-TSPYL5 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86VY4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86VY4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86VY4
PhosPhoSitePlusQ86VY4
Domains : Interpro (EBI)NAP-like_sf    NAP_family   
Domain families : Pfam (Sanger)NAP (PF00956)   
Domain families : Pfam (NCBI)pfam00956   
Conserved Domain (NCBI)TSPYL5
SuperfamilyQ86VY4
AlphaFold pdb e-kbQ86VY4   
Human Protein Atlas [tissue]ENSG00000180543-TSPYL5 [tissue]
HPRD15576
Protein Interaction databases
DIP (DOE-UCLA)Q86VY4
IntAct (EBI)Q86VY4
BioGRIDTSPYL5
STRING (EMBL)TSPYL5
ZODIACTSPYL5
Ontologies - Pathways
QuickGOQ86VY4
Ontology : AmiGOchromatin  chromatin binding  protein binding  nucleus  nucleosome assembly  positive regulation of cell population proliferation  positive regulation of cell population proliferation  positive regulation of protein ubiquitination  regulation of growth  histone binding  positive regulation of protein kinase B signaling  cellular response to gamma radiation  
Ontology : EGO-EBIchromatin  chromatin binding  protein binding  nucleus  nucleosome assembly  positive regulation of cell population proliferation  positive regulation of cell population proliferation  positive regulation of protein ubiquitination  regulation of growth  histone binding  positive regulation of protein kinase B signaling  cellular response to gamma radiation  
NDEx NetworkTSPYL5
Atlas of Cancer Signalling NetworkTSPYL5
Wikipedia pathwaysTSPYL5
Orthology - Evolution
OrthoDB85453
GeneTree (enSembl)ENSG00000180543
Phylogenetic Trees/Animal Genes : TreeFamTSPYL5
Homologs : HomoloGeneTSPYL5
Homology/Alignments : Family Browser (UCSC)TSPYL5
Gene fusions - Rearrangements
Fusion : QuiverTSPYL5
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTSPYL5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TSPYL5
dbVarTSPYL5
ClinVarTSPYL5
MonarchTSPYL5
1000_GenomesTSPYL5 
Exome Variant ServerTSPYL5
GNOMAD BrowserENSG00000180543
Varsome BrowserTSPYL5
ACMGTSPYL5 variants
VarityQ86VY4
Genomic Variants (DGV)TSPYL5 [DGVbeta]
DECIPHERTSPYL5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTSPYL5 
Mutations
ICGC Data PortalTSPYL5 
TCGA Data PortalTSPYL5 
Broad Tumor PortalTSPYL5
OASIS PortalTSPYL5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTSPYL5  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTSPYL5
Mutations and Diseases : HGMDTSPYL5
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTSPYL5
DgiDB (Drug Gene Interaction Database)TSPYL5
DoCM (Curated mutations)TSPYL5
CIViC (Clinical Interpretations of Variants in Cancer)TSPYL5
Cancer3DTSPYL5
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614721   
Orphanet
DisGeNETTSPYL5
MedgenTSPYL5
Genetic Testing Registry TSPYL5
NextProtQ86VY4 [Medical]
GENETestsTSPYL5
Target ValidationTSPYL5
Huge Navigator TSPYL5 [HugePedia]
ClinGenTSPYL5
Clinical trials, drugs, therapy
MyCancerGenomeTSPYL5
Protein Interactions : CTDTSPYL5
Pharm GKB GenePA128394738
PharosQ86VY4
Clinical trialTSPYL5
Miscellaneous
canSAR (ICR)TSPYL5
HarmonizomeTSPYL5
DataMed IndexTSPYL5
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTSPYL5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:36:41 CEST 2021

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