Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TSSC2 (tumor suppressing subtransferable candidate 2 pseudogene)

Identity

Alias_namestumor suppressing subtransferable candidate 2
Other alias-
HGNC (Hugo) TSSC2
LocusID (NCBI) 7261
Atlas_Id 42720
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 3380961 and ends at 3409148 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TSSC2   12384
Cards
Entrez_Gene (NCBI)TSSC2  7261  tumor suppressing subtransferable candidate 2 pseudogene
Aliases
GeneCards (Weizmann)TSSC2
Ensembl hg19 (Hinxton)ENSG00000223756 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223756 [Gene_View]  chr11:3380961-3409148 [Contig_View]  TSSC2 [Vega]
ICGC DataPortalENSG00000223756
TCGA cBioPortalTSSC2
AceView (NCBI)TSSC2
Genatlas (Paris)TSSC2
WikiGenes7261
SOURCE (Princeton)TSSC2
Genetics Home Reference (NIH)TSSC2
Genomic and cartography
GoldenPath hg38 (UCSC)TSSC2  -     chr11:3380961-3409148 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TSSC2  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblTSSC2 - 11p15.4 [CytoView hg19]  TSSC2 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBITSSC2 [Mapview hg19]  TSSC2 [Mapview hg38]
OMIM608999   
Gene and transcription
Genbank (Entrez)AK123648 AL528594 CN418596 DB226687
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TSSC2
Cluster EST : UnigeneHs.640450 [ NCBI ]
CGAP (NCI)Hs.640450
Alternative Splicing GalleryENSG00000223756
Gene ExpressionTSSC2 [ NCBI-GEO ]   TSSC2 [ EBI - ARRAY_EXPRESS ]   TSSC2 [ SEEK ]   TSSC2 [ MEM ]
Gene Expression Viewer (FireBrowse)TSSC2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)7261
GTEX Portal (Tissue expression)TSSC2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TSSC2
DMDM Disease mutations7261
Blocks (Seattle)TSSC2
Human Protein AtlasENSG00000223756
Protein Interaction databases
FunCoupENSG00000223756
BioGRIDTSSC2
STRING (EMBL)TSSC2
ZODIACTSSC2
Ontologies - Pathways
Huge Navigator TSSC2 [HugePedia]
snp3D : Map Gene to Disease7261
BioCentury BCIQTSSC2
ClinGenTSSC2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7261
Clinical trialTSSC2
Miscellaneous
canSAR (ICR)TSSC2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTSSC2
EVEXTSSC2
GoPubMedTSSC2
iHOPTSSC2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 17:17:54 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.