Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TSSC2 (tumor suppressing subtransferable candidate 2 (pseudogene))


Alias (NCBI)-
HGNC Alias nametumor-supressing STF cDNA 2
 asparagine-linked glycosylation 1 homolog (yeast, beta-1,4-mannosyltransferase) (ALG1) pseudogene
HGNC Previous nametumor suppressing subtransferable candidate 2
 tumor suppressing subtransferable candidate 2 pseudogene
LocusID (NCBI) 650368
Atlas_Id 42720
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 3380961 and ends at 3409148 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)TSSC2   12384
Entrez_Gene (NCBI)TSSC2    tumor suppressing subtransferable candidate 2 (pseudogene)
GeneCards (Weizmann)TSSC2
Ensembl hg19 (Hinxton)ENSG00000223756 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223756 [Gene_View]  ENSG00000223756 [Sequence]  chr11:3380961-3409148 [Contig_View]  TSSC2 [Vega]
ICGC DataPortalENSG00000223756
TCGA cBioPortalTSSC2
Genatlas (Paris)TSSC2
SOURCE (Princeton)TSSC2
Genetics Home Reference (NIH)TSSC2
Genomic and cartography
GoldenPath hg38 (UCSC)TSSC2  -     chr11:3380961-3409148 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TSSC2  -     11p15.4   [Description]    (hg19-Feb_2009)
GoldenPathTSSC2 - 11p15.4 [CytoView hg19]  TSSC2 - 11p15.4 [CytoView hg38]
Genome Data Viewer NCBITSSC2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK123648 AL528594 CN418596 DB226687
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TSSC2
Gene ExpressionTSSC2 [ NCBI-GEO ]   TSSC2 [ EBI - ARRAY_EXPRESS ]   TSSC2 [ SEEK ]   TSSC2 [ MEM ]
Gene Expression Viewer (FireBrowse)TSSC2 [ Firebrowse - Broad ]
GenevisibleExpression of TSSC2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)650368
GTEX Portal (Tissue expression)TSSC2
Human Protein AtlasENSG00000223756-TSSC2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TSSC2
Human Protein Atlas [tissue]ENSG00000223756-TSSC2 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:36:41 CEST 2021

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