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TSSK6 (testis specific serine kinase 6)

Identity

Alias (NCBI)CT72
FKSG82
SSTK
TSSK4
HGNC (Hugo) TSSK6
HGNC Alias symbSSTK
FLJ24002
CT72
HGNC Alias namecancer/testis antigen 72
LocusID (NCBI) 83983
Atlas_Id 75262
Location 19p13.11  [Link to chromosome band 19p13]
Location_base_pair Starts at 19514219 and ends at 19515548 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

 

Nomenclature
HGNC (Hugo)TSSK6   30410
Cards
Entrez_Gene (NCBI)TSSK6    testis specific serine kinase 6
AliasesCT72; FKSG82; SSTK; TSSK4
GeneCards (Weizmann)TSSK6
Ensembl hg19 (Hinxton)ENSG00000178093 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178093 [Gene_View]  ENSG00000178093 [Sequence]  chr19:19514219-19515548 [Contig_View]  TSSK6 [Vega]
ICGC DataPortalENSG00000178093
TCGA cBioPortalTSSK6
AceView (NCBI)TSSK6
Genatlas (Paris)TSSK6
SOURCE (Princeton)TSSK6
Genetics Home Reference (NIH)TSSK6
Genomic and cartography
GoldenPath hg38 (UCSC)TSSK6  -     chr19:19514219-19515548 -  19p13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TSSK6  -     19p13.11   [Description]    (hg19-Feb_2009)
GoldenPathTSSK6 - 19p13.11 [CytoView hg19]  TSSK6 - 19p13.11 [CytoView hg38]
ImmunoBaseENSG00000178093
Genome Data Viewer NCBITSSK6 [Mapview hg19]  
OMIM610712   
Gene and transcription
Genbank (Entrez)AA608857 AF329483 AF348077 AK058166 AK172841
RefSeq transcript (Entrez)NM_032037
Consensus coding sequences : CCDS (NCBI)TSSK6
Gene ExpressionTSSK6 [ NCBI-GEO ]   TSSK6 [ EBI - ARRAY_EXPRESS ]   TSSK6 [ SEEK ]   TSSK6 [ MEM ]
Gene Expression Viewer (FireBrowse)TSSK6 [ Firebrowse - Broad ]
GenevisibleExpression of TSSK6 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)83983
GTEX Portal (Tissue expression)TSSK6
Human Protein AtlasENSG00000178093-TSSK6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXA6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXA6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXA6
PhosPhoSitePlusQ9BXA6
Domaine pattern : Prosite (Expaxy)PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domains : Interpro (EBI)Kinase-like_dom_sf    Prot_kinase_dom    Protein_kinase_ATP_BS    Ser/Thr_kinase_AS    TSSK6_STKc   
Domain families : Pfam (Sanger)Pkinase (PF00069)   
Domain families : Pfam (NCBI)pfam00069   
Domain families : Smart (EMBL)S_TKc (SM00220)  
Conserved Domain (NCBI)TSSK6
SuperfamilyQ9BXA6
AlphaFold pdb e-kbQ9BXA6   
Human Protein Atlas [tissue]ENSG00000178093-TSSK6 [tissue]
HPRD15441
Protein Interaction databases
DIP (DOE-UCLA)Q9BXA6
IntAct (EBI)Q9BXA6
BioGRIDTSSK6
STRING (EMBL)TSSK6
ZODIACTSSK6
Ontologies - Pathways
QuickGOQ9BXA6
Ontology : AmiGOmagnesium ion binding  protein serine/threonine kinase activity  protein serine/threonine kinase activity  protein binding  ATP binding  nucleus  nucleus  cytoplasm  protein phosphorylation  protein phosphorylation  multicellular organism development  peptidyl-serine phosphorylation  sperm chromatin condensation  intracellular signal transduction  protein-containing complex binding  protein serine kinase activity  protein threonine kinase activity  
Ontology : EGO-EBImagnesium ion binding  protein serine/threonine kinase activity  protein serine/threonine kinase activity  protein binding  ATP binding  nucleus  nucleus  cytoplasm  protein phosphorylation  protein phosphorylation  multicellular organism development  peptidyl-serine phosphorylation  sperm chromatin condensation  intracellular signal transduction  protein-containing complex binding  protein serine kinase activity  protein threonine kinase activity  
NDEx NetworkTSSK6
Atlas of Cancer Signalling NetworkTSSK6
Wikipedia pathwaysTSSK6
Orthology - Evolution
OrthoDB83983
GeneTree (enSembl)ENSG00000178093
Phylogenetic Trees/Animal Genes : TreeFamTSSK6
Homologs : HomoloGeneTSSK6
Homology/Alignments : Family Browser (UCSC)TSSK6
Gene fusions - Rearrangements
Fusion : QuiverTSSK6
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTSSK6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TSSK6
dbVarTSSK6
ClinVarTSSK6
MonarchTSSK6
1000_GenomesTSSK6 
Exome Variant ServerTSSK6
GNOMAD BrowserENSG00000178093
Varsome BrowserTSSK6
ACMGTSSK6 variants
VarityQ9BXA6
Genomic Variants (DGV)TSSK6 [DGVbeta]
DECIPHERTSSK6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTSSK6 
Mutations
ICGC Data PortalTSSK6 
TCGA Data PortalTSSK6 
Broad Tumor PortalTSSK6
OASIS PortalTSSK6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTSSK6  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTSSK6
Mutations and Diseases : HGMDTSSK6
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTSSK6
DgiDB (Drug Gene Interaction Database)TSSK6
DoCM (Curated mutations)TSSK6
CIViC (Clinical Interpretations of Variants in Cancer)TSSK6
Cancer3DTSSK6
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610712   
Orphanet
DisGeNETTSSK6
MedgenTSSK6
Genetic Testing Registry TSSK6
NextProtQ9BXA6 [Medical]
GENETestsTSSK6
Target ValidationTSSK6
Huge Navigator TSSK6 [HugePedia]
ClinGenTSSK6
Clinical trials, drugs, therapy
MyCancerGenomeTSSK6
Protein Interactions : CTDTSSK6
Pharm GKB GenePA142670682
PharosQ9BXA6
Clinical trialTSSK6
Miscellaneous
canSAR (ICR)TSSK6
HarmonizomeTSSK6
DataMed IndexTSSK6
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTSSK6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:27:13 CEST 2021
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