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TST (thiosulfate sulfurtransferase)

Identity

Alias (NCBI)RDS
HGNC (Hugo) TST
HGNC Alias symbRDS
HGNC Alias namerhodanese
HGNC Previous namethiosulfate sulfurtransferase (rhodanese)
LocusID (NCBI) 7263
Atlas_Id 75263
Location 22q12.3  [Link to chromosome band 22q12]
Location_base_pair Starts at 37010865 and ends at 37019447 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TST   12388
Cards
Entrez_Gene (NCBI)TST    thiosulfate sulfurtransferase
AliasesRDS
GeneCards (Weizmann)TST
Ensembl hg19 (Hinxton)ENSG00000128311 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000128311 [Gene_View]  ENSG00000128311 [Sequence]  chr22:37010865-37019447 [Contig_View]  TST [Vega]
ICGC DataPortalENSG00000128311
TCGA cBioPortalTST
AceView (NCBI)TST
Genatlas (Paris)TST
SOURCE (Princeton)TST
Genetics Home Reference (NIH)TST
Genomic and cartography
GoldenPath hg38 (UCSC)TST  -     chr22:37010865-37019447 -  22q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TST  -     22q12.3   [Description]    (hg19-Feb_2009)
GoldenPathTST - 22q12.3 [CytoView hg19]  TST - 22q12.3 [CytoView hg38]
ImmunoBaseENSG00000128311
Genome Data Viewer NCBITST [Mapview hg19]  
OMIM180370   
Gene and transcription
Genbank (Entrez)AI869664 AK000862 AK091874 AK223521 AK301300
RefSeq transcript (Entrez)NM_001270483 NM_003312
Consensus coding sequences : CCDS (NCBI)TST
Gene ExpressionTST [ NCBI-GEO ]   TST [ EBI - ARRAY_EXPRESS ]   TST [ SEEK ]   TST [ MEM ]
Gene Expression Viewer (FireBrowse)TST [ Firebrowse - Broad ]
GenevisibleExpression of TST in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7263
GTEX Portal (Tissue expression)TST
Human Protein AtlasENSG00000128311-TST [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ16762   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ16762  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ16762
Catalytic activity : Enzyme2.8.1.1 [ Enzyme-Expasy ]   2.8.1.12.8.1.1 [ IntEnz-EBI ]   2.8.1.1 [ BRENDA ]   2.8.1.1 [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusQ16762
Domaine pattern : Prosite (Expaxy)RHODANESE_1 (PS00380)    RHODANESE_2 (PS00683)    RHODANESE_3 (PS50206)   
Domains : Interpro (EBI)Rhodanese-like_dom    Rhodanese-like_dom_sf    Thiosulphate_STrfase_CS   
Domain families : Pfam (Sanger)Rhodanese (PF00581)   
Domain families : Pfam (NCBI)pfam00581   
Domain families : Smart (EMBL)RHOD (SM00450)  
Conserved Domain (NCBI)TST
SuperfamilyQ16762
AlphaFold pdb e-kbQ16762   
Human Protein Atlas [tissue]ENSG00000128311-TST [tissue]
HPRD01583
Protein Interaction databases
DIP (DOE-UCLA)Q16762
IntAct (EBI)Q16762
BioGRIDTST
STRING (EMBL)TST
ZODIACTST
Ontologies - Pathways
QuickGOQ16762
Ontology : AmiGOsulfur amino acid catabolic process  thiosulfate sulfurtransferase activity  extracellular space  mitochondrion  mitochondrion  mitochondrial matrix  5S rRNA binding  cyanate catabolic process  transsulfuration  epithelial cell differentiation  rRNA import into mitochondrion  rRNA transport  
Ontology : EGO-EBIsulfur amino acid catabolic process  thiosulfate sulfurtransferase activity  extracellular space  mitochondrion  mitochondrion  mitochondrial matrix  5S rRNA binding  cyanate catabolic process  transsulfuration  epithelial cell differentiation  rRNA import into mitochondrion  rRNA transport  
NDEx NetworkTST
Atlas of Cancer Signalling NetworkTST
Wikipedia pathwaysTST
Orthology - Evolution
OrthoDB7263
GeneTree (enSembl)ENSG00000128311
Phylogenetic Trees/Animal Genes : TreeFamTST
Homologs : HomoloGeneTST
Homology/Alignments : Family Browser (UCSC)TST
Gene fusions - Rearrangements
Fusion : QuiverTST
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTST [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TST
dbVarTST
ClinVarTST
MonarchTST
1000_GenomesTST 
Exome Variant ServerTST
GNOMAD BrowserENSG00000128311
Varsome BrowserTST
ACMGTST variants
VarityQ16762
Genomic Variants (DGV)TST [DGVbeta]
DECIPHERTST [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTST 
Mutations
ICGC Data PortalTST 
TCGA Data PortalTST 
Broad Tumor PortalTST
OASIS PortalTST [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTST  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTST
Mutations and Diseases : HGMDTST
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTST
DgiDB (Drug Gene Interaction Database)TST
DoCM (Curated mutations)TST
CIViC (Clinical Interpretations of Variants in Cancer)TST
Cancer3DTST
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM180370   
Orphanet
DisGeNETTST
MedgenTST
Genetic Testing Registry TST
NextProtQ16762 [Medical]
GENETestsTST
Target ValidationTST
Huge Navigator TST [HugePedia]
ClinGenTST
Clinical trials, drugs, therapy
MyCancerGenomeTST
Protein Interactions : CTDTST
Pharm GKB GenePA37055
PharosQ16762
Clinical trialTST
Miscellaneous
canSAR (ICR)TST
HarmonizomeTST
DataMed IndexTST
Probes
Litterature
PubMed55 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTST
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:27:14 CEST 2021

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