Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TSTA3 (-)

Identity

Alias (NCBI)-
HGNC (Hugo) -
HGNC Alias symbFX
P35B
SDR4E1
HGNC Alias nameshort chain dehydrogenase/reductase family 4E, member 1
 GDP-L-fucose synthase
LocusID (NCBI) 7264
Atlas_Id 52892
Location 8q24.3  [Link to chromosome band 8q24]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
EEF1D (8q24.3) / TSTA3 (8q24.3)EEF1D 8q24.3 / TSTA3 8q24.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  EEF1D/TSTA3 (8q24)


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)TSTA3  7264  -
Aliases
GeneCards (Weizmann)TSTA3
Ensembl hg19 (Hinxton)ENSG00000104522 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000104522 [Gene_View]  ENSG00000104522 [Sequence]  - [Contig_View]  TSTA3 [Vega]
ICGC DataPortalENSG00000104522
TCGA cBioPortalTSTA3
AceView (NCBI)TSTA3
Genatlas (Paris)TSTA3
WikiGenes7264
SOURCE (Princeton)TSTA3
Genetics Home Reference (NIH)TSTA3
Genomic and cartography
GoldenPath hg38 (UCSC)TSTA3  -  
GoldenPath hg19 (UCSC)TSTA3  -  
GoldenPathTSTA3 - [CytoView hg19]  TSTA3 - [CytoView hg38]
ImmunoBaseENSG00000104522
genome Data Viewer NCBITSTA3 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TSTA3
Alternative Splicing GalleryENSG00000104522
Gene ExpressionTSTA3 [ NCBI-GEO ]   TSTA3 [ EBI - ARRAY_EXPRESS ]   TSTA3 [ SEEK ]   TSTA3 [ MEM ]
Gene Expression Viewer (FireBrowse)TSTA3 [ Firebrowse - Broad ]
GenevisibleExpression of TSTA3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7264
GTEX Portal (Tissue expression)TSTA3
Human Protein AtlasENSG00000104522-TSTA3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TSTA3
DMDM Disease mutations7264
Blocks (Seattle)TSTA3
Human Protein Atlas [tissue]ENSG00000104522-TSTA3 [tissue]
HPRD00654
IPIIPI00014361   IPI00909958   IPI00981359   IPI01012947   IPI00984362   IPI00980982   IPI00982011   
Protein Interaction databases
FunCoupENSG00000104522
BioGRIDTSTA3
STRING (EMBL)TSTA3
ZODIACTSTA3
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease7264
BioCentury BCIQTSTA3
ClinGenTSTA3
Clinical trials, drugs, therapy
Protein Interactions : CTD7264
Pharm GKB GenePA37056
Clinical trialTSTA3
Miscellaneous
canSAR (ICR)TSTA3 (select the gene name)
HarmonizomeTSTA3
DataMed IndexTSTA3
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineTSTA3
EVEXTSTA3
GoPubMedTSTA3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 14 14:37:32 CEST 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.