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TSTD3 (thiosulfate sulfurtransferase like domain containing 3)

Identity

Alias (NCBI)-
HGNC (Hugo) TSTD3
LocusID (NCBI) 100130890
Atlas_Id 75266
Location 6q16.2  [Link to chromosome band 6q16]
Location_base_pair Starts at 99520994 and ends at 99533183 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TSTD3   40910
Cards
Entrez_Gene (NCBI)TSTD3    thiosulfate sulfurtransferase like domain containing 3
Aliases
GeneCards (Weizmann)TSTD3
Ensembl hg19 (Hinxton)ENSG00000279170 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000279170 [Gene_View]  ENSG00000279170 [Sequence]  chr6:99520994-99533183 [Contig_View]  TSTD3 [Vega]
ICGC DataPortalENSG00000279170
TCGA cBioPortalTSTD3
AceView (NCBI)TSTD3
Genatlas (Paris)TSTD3
SOURCE (Princeton)TSTD3
Genetics Home Reference (NIH)TSTD3
Genomic and cartography
GoldenPath hg38 (UCSC)TSTD3  -     chr6:99520994-99533183 +  6q16.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TSTD3  -     6q16.2   [Description]    (hg19-Feb_2009)
GoldenPathTSTD3 - 6q16.2 [CytoView hg19]  TSTD3 - 6q16.2 [CytoView hg38]
ImmunoBaseENSG00000279170
Genome Data Viewer NCBITSTD3 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC047952 BX647075 DN996863
RefSeq transcript (Entrez)NM_001195131
Consensus coding sequences : CCDS (NCBI)TSTD3
Gene ExpressionTSTD3 [ NCBI-GEO ]   TSTD3 [ EBI - ARRAY_EXPRESS ]   TSTD3 [ SEEK ]   TSTD3 [ MEM ]
Gene Expression Viewer (FireBrowse)TSTD3 [ Firebrowse - Broad ]
GenevisibleExpression of TSTD3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100130890
GTEX Portal (Tissue expression)TSTD3
Human Protein AtlasENSG00000279170-TSTD3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtH0UI37   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtH0UI37  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProH0UI37
PhosPhoSitePlusH0UI37
Domains : Interpro (EBI)Rhodanese-like_dom    Rhodanese-like_dom_sf   
Domain families : Pfam (Sanger)Rhodanese (PF00581)   
Domain families : Pfam (NCBI)pfam00581   
Conserved Domain (NCBI)TSTD3
SuperfamilyH0UI37
AlphaFold pdb e-kbH0UI37   
Human Protein Atlas [tissue]ENSG00000279170-TSTD3 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)H0UI37
IntAct (EBI)H0UI37
BioGRIDTSTD3
STRING (EMBL)TSTD3
ZODIACTSTD3
Ontologies - Pathways
QuickGOH0UI37
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkTSTD3
Atlas of Cancer Signalling NetworkTSTD3
Wikipedia pathwaysTSTD3
Orthology - Evolution
OrthoDB100130890
GeneTree (enSembl)ENSG00000279170
Phylogenetic Trees/Animal Genes : TreeFamTSTD3
Homologs : HomoloGeneTSTD3
Homology/Alignments : Family Browser (UCSC)TSTD3
Gene fusions - Rearrangements
Fusion : QuiverTSTD3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTSTD3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TSTD3
dbVarTSTD3
ClinVarTSTD3
MonarchTSTD3
1000_GenomesTSTD3 
Exome Variant ServerTSTD3
GNOMAD BrowserENSG00000279170
Varsome BrowserTSTD3
ACMGTSTD3 variants
VarityH0UI37
Genomic Variants (DGV)TSTD3 [DGVbeta]
DECIPHERTSTD3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTSTD3 
Mutations
ICGC Data PortalTSTD3 
TCGA Data PortalTSTD3 
Broad Tumor PortalTSTD3
OASIS PortalTSTD3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTSTD3  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTSTD3
Mutations and Diseases : HGMDTSTD3
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTSTD3
DgiDB (Drug Gene Interaction Database)TSTD3
DoCM (Curated mutations)TSTD3
CIViC (Clinical Interpretations of Variants in Cancer)TSTD3
Cancer3DTSTD3
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTSTD3
MedgenTSTD3
Genetic Testing Registry TSTD3
NextProtH0UI37 [Medical]
GENETestsTSTD3
Target ValidationTSTD3
Huge Navigator TSTD3 [HugePedia]
ClinGenTSTD3
Clinical trials, drugs, therapy
MyCancerGenomeTSTD3
Protein Interactions : CTDTSTD3
Pharm GKB GenePA166049070
PharosH0UI37
Clinical trialTSTD3
Miscellaneous
canSAR (ICR)TSTD3
HarmonizomeTSTD3
DataMed IndexTSTD3
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXTSTD3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:27:14 CEST 2021

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