Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TTC14 (tetratricopeptide repeat domain 14)

Identity

Alias (NCBI)DRDL5813
PRO19630
HGNC (Hugo) TTC14
HGNC Alias symbFLJ00166
KIAA1980
LocusID (NCBI) 151613
Atlas_Id 75269
Location 3q26.33  [Link to chromosome band 3q26]
Location_base_pair Starts at 180602163 and ends at 180611130 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TTC14 (3q26.33) / PTER (10p13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TTC14   24697
Cards
Entrez_Gene (NCBI)TTC14    tetratricopeptide repeat domain 14
AliasesDRDL5813; PRO19630
GeneCards (Weizmann)TTC14
Ensembl hg19 (Hinxton)ENSG00000163728 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163728 [Gene_View]  ENSG00000163728 [Sequence]  chr3:180602163-180611130 [Contig_View]  TTC14 [Vega]
ICGC DataPortalENSG00000163728
TCGA cBioPortalTTC14
AceView (NCBI)TTC14
Genatlas (Paris)TTC14
SOURCE (Princeton)TTC14
Genetics Home Reference (NIH)TTC14
Genomic and cartography
GoldenPath hg38 (UCSC)TTC14  -     chr3:180602163-180611130 +  3q26.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTC14  -     3q26.33   [Description]    (hg19-Feb_2009)
GoldenPathTTC14 - 3q26.33 [CytoView hg19]  TTC14 - 3q26.33 [CytoView hg38]
ImmunoBaseENSG00000163728
Genome Data Viewer NCBITTC14 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB075860 AI088990 AI742462 AI811067 AK055984
RefSeq transcript (Entrez)NM_001042601 NM_001288582 NM_133462
Consensus coding sequences : CCDS (NCBI)TTC14
Gene ExpressionTTC14 [ NCBI-GEO ]   TTC14 [ EBI - ARRAY_EXPRESS ]   TTC14 [ SEEK ]   TTC14 [ MEM ]
Gene Expression Viewer (FireBrowse)TTC14 [ Firebrowse - Broad ]
GenevisibleExpression of TTC14 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)151613
GTEX Portal (Tissue expression)TTC14
Human Protein AtlasENSG00000163728-TTC14 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96N46   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96N46  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96N46
PhosPhoSitePlusQ96N46
Domaine pattern : Prosite (Expaxy)S1 (PS50126)    TPR (PS50005)    TPR_REGION (PS50293)   
Domains : Interpro (EBI)NA-bd_OB-fold    S1_domain    TPR-contain_dom    TPR-like_helical_dom_sf    TPR_repeat    TTC14   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)TPR (SM00028)  
Conserved Domain (NCBI)TTC14
SuperfamilyQ96N46
AlphaFold pdb e-kbQ96N46   
Human Protein Atlas [tissue]ENSG00000163728-TTC14 [tissue]
HPRD15579
Protein Interaction databases
DIP (DOE-UCLA)Q96N46
IntAct (EBI)Q96N46
BioGRIDTTC14
STRING (EMBL)TTC14
ZODIACTTC14
Ontologies - Pathways
QuickGOQ96N46
Ontology : AmiGOnucleic acid binding  
Ontology : EGO-EBInucleic acid binding  
NDEx NetworkTTC14
Atlas of Cancer Signalling NetworkTTC14
Wikipedia pathwaysTTC14
Orthology - Evolution
OrthoDB151613
GeneTree (enSembl)ENSG00000163728
Phylogenetic Trees/Animal Genes : TreeFamTTC14
Homologs : HomoloGeneTTC14
Homology/Alignments : Family Browser (UCSC)TTC14
Gene fusions - Rearrangements
Fusion : QuiverTTC14
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTTC14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TTC14
dbVarTTC14
ClinVarTTC14
MonarchTTC14
1000_GenomesTTC14 
Exome Variant ServerTTC14
GNOMAD BrowserENSG00000163728
Varsome BrowserTTC14
ACMGTTC14 variants
VarityQ96N46
Genomic Variants (DGV)TTC14 [DGVbeta]
DECIPHERTTC14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTTC14 
Mutations
ICGC Data PortalTTC14 
TCGA Data PortalTTC14 
Broad Tumor PortalTTC14
OASIS PortalTTC14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTTC14  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTTC14
Mutations and Diseases : HGMDTTC14
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTTC14
DgiDB (Drug Gene Interaction Database)TTC14
DoCM (Curated mutations)TTC14
CIViC (Clinical Interpretations of Variants in Cancer)TTC14
Cancer3DTTC14
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTTC14
MedgenTTC14
Genetic Testing Registry TTC14
NextProtQ96N46 [Medical]
GENETestsTTC14
Target ValidationTTC14
Huge Navigator TTC14 [HugePedia]
ClinGenTTC14
Clinical trials, drugs, therapy
MyCancerGenomeTTC14
Protein Interactions : CTDTTC14
Pharm GKB GenePA134937037
PharosQ96N46
Clinical trialTTC14
Miscellaneous
canSAR (ICR)TTC14
HarmonizomeTTC14
DataMed IndexTTC14
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTTC14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:27:15 CEST 2021

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