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TTC14 (tetratricopeptide repeat domain 14)

Identity

Alias_symbol (synonym)FLJ00166
KIAA1980
Other aliasDRDL5813
PRO19630
HGNC (Hugo) TTC14
LocusID (NCBI) 151613
Atlas_Id 75269
Location 3q26.33  [Link to chromosome band 3q26]
Location_base_pair Starts at 180602130 and ends at 180611130 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
TTC14 (3q26.33) / PTER (10p13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTC14   24697
Cards
Entrez_Gene (NCBI)TTC14  151613  tetratricopeptide repeat domain 14
AliasesDRDL5813; PRO19630
GeneCards (Weizmann)TTC14
Ensembl hg19 (Hinxton)ENSG00000163728 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163728 [Gene_View]  chr3:180602130-180611130 [Contig_View]  TTC14 [Vega]
ICGC DataPortalENSG00000163728
TCGA cBioPortalTTC14
AceView (NCBI)TTC14
Genatlas (Paris)TTC14
WikiGenes151613
SOURCE (Princeton)TTC14
Genetics Home Reference (NIH)TTC14
Genomic and cartography
GoldenPath hg38 (UCSC)TTC14  -     chr3:180602130-180611130 +  3q26.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTC14  -     3q26.33   [Description]    (hg19-Feb_2009)
EnsemblTTC14 - 3q26.33 [CytoView hg19]  TTC14 - 3q26.33 [CytoView hg38]
Mapping of homologs : NCBITTC14 [Mapview hg19]  TTC14 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB075860 AI088990 AI742462 AI811067 AK055984
RefSeq transcript (Entrez)NM_001042601 NM_001288582 NM_133462
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TTC14
Cluster EST : UnigeneHs.43213 [ NCBI ]
CGAP (NCI)Hs.43213
Alternative Splicing GalleryENSG00000163728
Gene ExpressionTTC14 [ NCBI-GEO ]   TTC14 [ EBI - ARRAY_EXPRESS ]   TTC14 [ SEEK ]   TTC14 [ MEM ]
Gene Expression Viewer (FireBrowse)TTC14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)151613
GTEX Portal (Tissue expression)TTC14
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96N46   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96N46  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96N46
Splice isoforms : SwissVarQ96N46
PhosPhoSitePlusQ96N46
Domaine pattern : Prosite (Expaxy)S1 (PS50126)    TPR (PS50005)    TPR_REGION (PS50293)   
Domains : Interpro (EBI)NA-bd_OB-fold    S1_domain    TPR-contain_dom    TPR-like_helical_dom    TPR_repeat   
Domain families : Pfam (Sanger)TPR_11 (PF13414)   
Domain families : Pfam (NCBI)pfam13414   
Domain families : Smart (EMBL)TPR (SM00028)  
Conserved Domain (NCBI)TTC14
DMDM Disease mutations151613
Blocks (Seattle)TTC14
SuperfamilyQ96N46
Human Protein AtlasENSG00000163728
Peptide AtlasQ96N46
HPRD15579
IPIIPI00550503   IPI00432278   IPI00941278   IPI00947093   IPI00946281   IPI00945043   IPI00947298   IPI00947434   
Protein Interaction databases
DIP (DOE-UCLA)Q96N46
IntAct (EBI)Q96N46
FunCoupENSG00000163728
BioGRIDTTC14
STRING (EMBL)TTC14
ZODIACTTC14
Ontologies - Pathways
QuickGOQ96N46
Ontology : AmiGOnucleic acid binding  
Ontology : EGO-EBInucleic acid binding  
NDEx NetworkTTC14
Atlas of Cancer Signalling NetworkTTC14
Wikipedia pathwaysTTC14
Orthology - Evolution
OrthoDB151613
GeneTree (enSembl)ENSG00000163728
Phylogenetic Trees/Animal Genes : TreeFamTTC14
HOVERGENQ96N46
HOGENOMQ96N46
Homologs : HomoloGeneTTC14
Homology/Alignments : Family Browser (UCSC)TTC14
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTTC14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TTC14
dbVarTTC14
ClinVarTTC14
1000_GenomesTTC14 
Exome Variant ServerTTC14
ExAC (Exome Aggregation Consortium)TTC14 (select the gene name)
Genetic variants : HAPMAP151613
Genomic Variants (DGV)TTC14 [DGVbeta]
DECIPHERTTC14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTTC14 
Mutations
ICGC Data PortalTTC14 
TCGA Data PortalTTC14 
Broad Tumor PortalTTC14
OASIS PortalTTC14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTTC14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTTC14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TTC14
DgiDB (Drug Gene Interaction Database)TTC14
DoCM (Curated mutations)TTC14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TTC14 (select a term)
intoGenTTC14
Cancer3DTTC14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTTC14
Genetic Testing Registry TTC14
NextProtQ96N46 [Medical]
TSGene151613
GENETestsTTC14
Target ValidationTTC14
Huge Navigator TTC14 [HugePedia]
snp3D : Map Gene to Disease151613
BioCentury BCIQTTC14
ClinGenTTC14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD151613
Chemical/Pharm GKB GenePA134937037
Clinical trialTTC14
Miscellaneous
canSAR (ICR)TTC14 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTC14
EVEXTTC14
GoPubMedTTC14
iHOPTTC14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:47:28 CEST 2017

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