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TTC23L (tetratricopeptide repeat domain 23 like)

Identity

Alias (NCBI)MC25-1
HGNC (Hugo) TTC23L
HGNC Alias symbFLJ25439
HGNC Previous nametetratricopeptide repeat domain 23-like
LocusID (NCBI) 153657
Atlas_Id 75276
Location 5p13.2  [Link to chromosome band 5p13]
Location_base_pair Starts at 34839164 and ends at 34900501 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TTC23L   26355
Cards
Entrez_Gene (NCBI)TTC23L    tetratricopeptide repeat domain 23 like
AliasesMC25-1
GeneCards (Weizmann)TTC23L
Ensembl hg19 (Hinxton)ENSG00000205838 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205838 [Gene_View]  ENSG00000205838 [Sequence]  chr5:34839164-34900501 [Contig_View]  TTC23L [Vega]
ICGC DataPortalENSG00000205838
TCGA cBioPortalTTC23L
AceView (NCBI)TTC23L
Genatlas (Paris)TTC23L
SOURCE (Princeton)TTC23L
Genetics Home Reference (NIH)TTC23L
Genomic and cartography
GoldenPath hg38 (UCSC)TTC23L  -     chr5:34839164-34900501 +  5p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTC23L  -     5p13.2   [Description]    (hg19-Feb_2009)
GoldenPathTTC23L - 5p13.2 [CytoView hg19]  TTC23L - 5p13.2 [CytoView hg38]
ImmunoBaseENSG00000205838
Genome Data Viewer NCBITTC23L [Mapview hg19]  
OMIM616344   
Gene and transcription
Genbank (Entrez)AK058168 AK293829 AY498865 BC032871 BC057775
RefSeq transcript (Entrez)NM_001317949 NM_001386169 NM_001386170 NM_001386171 NM_001386172 NM_144725
Consensus coding sequences : CCDS (NCBI)TTC23L
Gene ExpressionTTC23L [ NCBI-GEO ]   TTC23L [ EBI - ARRAY_EXPRESS ]   TTC23L [ SEEK ]   TTC23L [ MEM ]
Gene Expression Viewer (FireBrowse)TTC23L [ Firebrowse - Broad ]
GenevisibleExpression of TTC23L in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)153657
GTEX Portal (Tissue expression)TTC23L
Human Protein AtlasENSG00000205838-TTC23L [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6PF05   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6PF05  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6PF05
PhosPhoSitePlusQ6PF05
Domains : Interpro (EBI)TPR-like_helical_dom_sf    TTC23/TTC23L   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTC23L
SuperfamilyQ6PF05
AlphaFold pdb e-kbQ6PF05   
Human Protein Atlas [tissue]ENSG00000205838-TTC23L [tissue]
HPRD08691
Protein Interaction databases
DIP (DOE-UCLA)Q6PF05
IntAct (EBI)Q6PF05
BioGRIDTTC23L
STRING (EMBL)TTC23L
ZODIACTTC23L
Ontologies - Pathways
QuickGOQ6PF05
Ontology : AmiGOprotein binding  cytoplasm  microtubule organizing center  spindle  midbody  response to endoplasmic reticulum stress  
Ontology : EGO-EBIprotein binding  cytoplasm  microtubule organizing center  spindle  midbody  response to endoplasmic reticulum stress  
NDEx NetworkTTC23L
Atlas of Cancer Signalling NetworkTTC23L
Wikipedia pathwaysTTC23L
Orthology - Evolution
OrthoDB153657
GeneTree (enSembl)ENSG00000205838
Phylogenetic Trees/Animal Genes : TreeFamTTC23L
Homologs : HomoloGeneTTC23L
Homology/Alignments : Family Browser (UCSC)TTC23L
Gene fusions - Rearrangements
Fusion : QuiverTTC23L
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTTC23L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TTC23L
dbVarTTC23L
ClinVarTTC23L
MonarchTTC23L
1000_GenomesTTC23L 
Exome Variant ServerTTC23L
GNOMAD BrowserENSG00000205838
Varsome BrowserTTC23L
ACMGTTC23L variants
VarityQ6PF05
Genomic Variants (DGV)TTC23L [DGVbeta]
DECIPHERTTC23L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTTC23L 
Mutations
ICGC Data PortalTTC23L 
TCGA Data PortalTTC23L 
Broad Tumor PortalTTC23L
OASIS PortalTTC23L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTTC23L  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTTC23L
Mutations and Diseases : HGMDTTC23L
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTTC23L
DgiDB (Drug Gene Interaction Database)TTC23L
DoCM (Curated mutations)TTC23L
CIViC (Clinical Interpretations of Variants in Cancer)TTC23L
Cancer3DTTC23L
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616344   
Orphanet
DisGeNETTTC23L
MedgenTTC23L
Genetic Testing Registry TTC23L
NextProtQ6PF05 [Medical]
GENETestsTTC23L
Target ValidationTTC23L
Huge Navigator TTC23L [HugePedia]
ClinGenTTC23L
Clinical trials, drugs, therapy
MyCancerGenomeTTC23L
Protein Interactions : CTDTTC23L
Pharm GKB GenePA162407169
PharosQ6PF05
Clinical trialTTC23L
Miscellaneous
canSAR (ICR)TTC23L
HarmonizomeTTC23L
DataMed IndexTTC23L
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTTC23L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:27:16 CEST 2021

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