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TTC24 (tetratricopeptide repeat domain 24)

Identity

Other alias-
HGNC (Hugo) TTC24
LocusID (NCBI) 164118
Atlas_Id 75277
Location 1q22  [Link to chromosome band 1q22]
Location_base_pair Starts at 156581365 and ends at 156587726 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTC24   32348
Cards
Entrez_Gene (NCBI)TTC24  164118  tetratricopeptide repeat domain 24
Aliases
GeneCards (Weizmann)TTC24
Ensembl hg19 (Hinxton)ENSG00000187862 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187862 [Gene_View]  chr1:156581365-156587726 [Contig_View]  TTC24 [Vega]
ICGC DataPortalENSG00000187862
TCGA cBioPortalTTC24
AceView (NCBI)TTC24
Genatlas (Paris)TTC24
WikiGenes164118
SOURCE (Princeton)TTC24
Genetics Home Reference (NIH)TTC24
Genomic and cartography
GoldenPath hg38 (UCSC)TTC24  -     chr1:156581365-156587726 +  1q22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTC24  -     1q22   [Description]    (hg19-Feb_2009)
EnsemblTTC24 - 1q22 [CytoView hg19]  TTC24 - 1q22 [CytoView hg38]
Mapping of homologs : NCBITTC24 [Mapview hg19]  TTC24 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW628680 BQ216668 BX414790
RefSeq transcript (Entrez)NM_001105669
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TTC24
Cluster EST : UnigeneHs.447851 [ NCBI ]
CGAP (NCI)Hs.447851
Alternative Splicing GalleryENSG00000187862
Gene ExpressionTTC24 [ NCBI-GEO ]   TTC24 [ EBI - ARRAY_EXPRESS ]   TTC24 [ SEEK ]   TTC24 [ MEM ]
Gene Expression Viewer (FireBrowse)TTC24 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)164118
GTEX Portal (Tissue expression)TTC24
Protein : pattern, domain, 3D structure
UniProt/SwissProtA2A3L6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA2A3L6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA2A3L6
Splice isoforms : SwissVarA2A3L6
PhosPhoSitePlusA2A3L6
Domaine pattern : Prosite (Expaxy)TPR (PS50005)    TPR_REGION (PS50293)   
Domains : Interpro (EBI)TPR-contain_dom    TPR-like_helical_dom    TPR_24    TPR_repeat   
Domain families : Pfam (Sanger)TPR_7 (PF13176)   
Domain families : Pfam (NCBI)pfam13176   
Domain families : Smart (EMBL)TPR (SM00028)  
Conserved Domain (NCBI)TTC24
DMDM Disease mutations164118
Blocks (Seattle)TTC24
SuperfamilyA2A3L6
Human Protein AtlasENSG00000187862
Peptide AtlasA2A3L6
IPIIPI00657961   IPI00868778   IPI00514259   
Protein Interaction databases
DIP (DOE-UCLA)A2A3L6
IntAct (EBI)A2A3L6
FunCoupENSG00000187862
BioGRIDTTC24
STRING (EMBL)TTC24
ZODIACTTC24
Ontologies - Pathways
QuickGOA2A3L6
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkTTC24
Atlas of Cancer Signalling NetworkTTC24
Wikipedia pathwaysTTC24
Orthology - Evolution
OrthoDB164118
GeneTree (enSembl)ENSG00000187862
Phylogenetic Trees/Animal Genes : TreeFamTTC24
HOVERGENA2A3L6
HOGENOMA2A3L6
Homologs : HomoloGeneTTC24
Homology/Alignments : Family Browser (UCSC)TTC24
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTTC24 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TTC24
dbVarTTC24
ClinVarTTC24
1000_GenomesTTC24 
Exome Variant ServerTTC24
ExAC (Exome Aggregation Consortium)TTC24 (select the gene name)
Genetic variants : HAPMAP164118
Genomic Variants (DGV)TTC24 [DGVbeta]
DECIPHERTTC24 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTTC24 
Mutations
ICGC Data PortalTTC24 
TCGA Data PortalTTC24 
Broad Tumor PortalTTC24
OASIS PortalTTC24 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTTC24  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTTC24
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TTC24
DgiDB (Drug Gene Interaction Database)TTC24
DoCM (Curated mutations)TTC24 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TTC24 (select a term)
intoGenTTC24
Cancer3DTTC24(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTTC24
Genetic Testing Registry TTC24
NextProtA2A3L6 [Medical]
TSGene164118
GENETestsTTC24
Target ValidationTTC24
Huge Navigator TTC24 [HugePedia]
snp3D : Map Gene to Disease164118
BioCentury BCIQTTC24
ClinGenTTC24
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD164118
Chemical/Pharm GKB GenePA142670676
Clinical trialTTC24
Miscellaneous
canSAR (ICR)TTC24 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTC24
EVEXTTC24
GoPubMedTTC24
iHOPTTC24
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:47:30 CEST 2017

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