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TTC28-AS1 (TTC28 antisense RNA 1)

Identity

Alias_namesTTC28AS
TTC28-AS
TTC28 antisense RNA (non-protein coding)
TTC28 antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)KIAA1648
Other aliasdJ353E16.2
HGNC (Hugo) TTC28-AS1
LocusID (NCBI) 284900
Atlas_Id 75281
Location 22q12.1  [Link to chromosome band 22q12]
Location_base_pair Starts at 28315364 and ends at 28320951 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
EMP1 (12p13.1) / TTC28-AS1 (22q12.1)TTC28-AS1 (22q12.1) / TTC28-AS1 (22q12.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTC28-AS1   29336
Cards
Entrez_Gene (NCBI)TTC28-AS1  284900  TTC28 antisense RNA 1
AliasesTTC28-AS; TTC28AS; dJ353E16.2
GeneCards (Weizmann)TTC28-AS1
Ensembl hg19 (Hinxton)ENSG00000235954 [Gene_View]  chr22:28315364-28320951 [Contig_View]  TTC28-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000235954 [Gene_View]  chr22:28315364-28320951 [Contig_View]  TTC28-AS1 [Vega]
ICGC DataPortalENSG00000235954
TCGA cBioPortalTTC28-AS1
AceView (NCBI)TTC28-AS1
Genatlas (Paris)TTC28-AS1
WikiGenes284900
SOURCE (Princeton)TTC28-AS1
Genetics Home Reference (NIH)TTC28-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)TTC28-AS1  -     chr22:28315364-28320951 +  22q12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TTC28-AS1  -     22q12.1   [Description]    (hg38-Dec_2013)
EnsemblTTC28-AS1 - 22q12.1 [CytoView hg19]  TTC28-AS1 - 22q12.1 [CytoView hg38]
Mapping of homologs : NCBITTC28-AS1 [Mapview hg19]  TTC28-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB051435 AL832597 BC016779 BC028176 BC060374
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)TTC28-AS1
Cluster EST : UnigeneHs.602319 [ NCBI ]
CGAP (NCI)Hs.602319
Alternative Splicing GalleryENSG00000235954
Gene ExpressionTTC28-AS1 [ NCBI-GEO ]   TTC28-AS1 [ EBI - ARRAY_EXPRESS ]   TTC28-AS1 [ SEEK ]   TTC28-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TTC28-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)284900
GTEX Portal (Tissue expression)TTC28-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTC28-AS1
DMDM Disease mutations284900
Blocks (Seattle)TTC28-AS1
Human Protein AtlasENSG00000235954
IPIIPI00514176   
Protein Interaction databases
FunCoupENSG00000235954
BioGRIDTTC28-AS1
STRING (EMBL)TTC28-AS1
ZODIACTTC28-AS1
Ontologies - Pathways
Huge Navigator TTC28-AS1 [HugePedia]
snp3D : Map Gene to Disease284900
BioCentury BCIQTTC28-AS1
ClinGenTTC28-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284900
Chemical/Pharm GKB GenePA165378373
Clinical trialTTC28-AS1
Miscellaneous
canSAR (ICR)TTC28-AS1 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTC28-AS1
EVEXTTC28-AS1
GoPubMedTTC28-AS1
iHOPTTC28-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:50:08 CET 2017

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