TTC29 (tetratricopeptide repeat domain 29)

2014-08-01  

Identity

HGNC
TTC29
LOCATION
4q31.22
LOCUSID
83894
ALIAS
NYD-SP14,SPGF42,TBPP2A
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 83894
MIM: 618735
HGNC: 29936
Ensembl: ENSG00000137473

Variants:

dbSNP: 83894
ClinVar: 83894
TCGA: ENSG00000137473
COSMIC: TTC29

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000137473ENST00000325106Q8NA56
ENSG00000137473ENST00000325106A0A140VK62
ENSG00000137473ENST00000398886H7BYT6
ENSG00000137473ENST00000502319D6RJF6
ENSG00000137473ENST00000504425E7EQ14
ENSG00000137473ENST00000508306E7EQZ6
ENSG00000137473ENST00000513335G5E9Z5
ENSG00000137473ENST00000515315D6R945

Expression (GTEx)

0
10
20
30
40
50
60
70
80
90
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
280052672017Human gingiva transcriptome during wound healing.6
317352922019Mutations in TTC29, Encoding an Evolutionarily Conserved Axonemal Protein, Result in Asthenozoospermia and Male Infertility.1

Citation

Dessen P

TTC29 (tetratricopeptide repeat domain 29)

Atlas Genet Cytogenet Oncol Haematol. 2014-08-01

Online version: http://atlasgeneticsoncology.org/gene/54734/ttc29