Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TTC3 (tetratricopeptide repeat domain 3)

Identity

Alias (NCBI)DCRR1
RNF105
TPRDIII
HGNC (Hugo) TTC3
HGNC Alias symbTPRD
TPRDI
DCRR1
TPRDII
TPRDIII
RNF105
LocusID (NCBI) 7267
Atlas_Id 75282
Location 21q22.13  [Link to chromosome band 21q22]
Location_base_pair Starts at 37082947 and ends at 37203118 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CCDC71 (3p21.31) / TTC3 (21q22.13)CENPP (9q22.31) / TTC3 (21q22.13)DYRK1A (21q22.13) / TTC3 (21q22.13)
SMARCB1 (22q11.23) / TTC3 (21q22.13)TTC3 (21q22.13) / BRWD1 (21q22.2)TTC3 (21q22.13) / TTC3 (21q22.13)
TTC3 (21q22.13) / UBR5 (8q22.3)WHSC1L1 (8p11.23) / TTC3 (21q22.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TTC3   12393
Cards
Entrez_Gene (NCBI)TTC3    tetratricopeptide repeat domain 3
AliasesDCRR1; RNF105; TPRDIII
GeneCards (Weizmann)TTC3
Ensembl hg19 (Hinxton)ENSG00000182670 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182670 [Gene_View]  ENSG00000182670 [Sequence]  chr21:37082947-37203118 [Contig_View]  TTC3 [Vega]
ICGC DataPortalENSG00000182670
TCGA cBioPortalTTC3
AceView (NCBI)TTC3
Genatlas (Paris)TTC3
SOURCE (Princeton)TTC3
Genetics Home Reference (NIH)TTC3
Genomic and cartography
GoldenPath hg38 (UCSC)TTC3  -     chr21:37082947-37203118 +  21q22.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTC3  -     21q22.13   [Description]    (hg19-Feb_2009)
GoldenPathTTC3 - 21q22.13 [CytoView hg19]  TTC3 - 21q22.13 [CytoView hg38]
ImmunoBaseENSG00000182670
Genome Data Viewer NCBITTC3 [Mapview hg19]  
OMIM602259   
Gene and transcription
Genbank (Entrez)AA482675 AI066542 AI393300 AI745113 AJ001866
RefSeq transcript (Entrez)NM_001001894 NM_001320703 NM_001320704 NM_001330681 NM_001330682 NM_001330683 NM_001353936 NM_001353937 NM_001353938 NM_003316
Consensus coding sequences : CCDS (NCBI)TTC3
Gene ExpressionTTC3 [ NCBI-GEO ]   TTC3 [ EBI - ARRAY_EXPRESS ]   TTC3 [ SEEK ]   TTC3 [ MEM ]
Gene Expression Viewer (FireBrowse)TTC3 [ Firebrowse - Broad ]
GenevisibleExpression of TTC3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7267
GTEX Portal (Tissue expression)TTC3
Human Protein AtlasENSG00000182670-TTC3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTC3
Human Protein Atlas [tissue]ENSG00000182670-TTC3 [tissue]
HPRD03773
Protein Interaction databases
BioGRIDTTC3
STRING (EMBL)TTC3
ZODIACTTC3
Ontologies - Pathways
Litterature
PubMed38 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTTC3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:27:17 CEST 2021

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