Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TTC39A-AS1 (TTC39A antisense RNA 1)


Alias (NCBI)-
HGNC (Hugo) TTC39A-AS1
LocusID (NCBI) 102724097
Atlas_Id 75292
Location 1p32.3  [Link to chromosome band 1p32]
Location_base_pair Starts at 51329654 and ends at 51331281 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)TTC39A-AS1   40851
Entrez_Gene (NCBI)TTC39A-AS1    TTC39A antisense RNA 1
GeneCards (Weizmann)TTC39A-AS1
Ensembl hg19 (Hinxton)ENSG00000261664 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261664 [Gene_View]  ENSG00000261664 [Sequence]  chr1:51329654-51331281 [Contig_View]  TTC39A-AS1 [Vega]
ICGC DataPortalENSG00000261664
TCGA cBioPortalTTC39A-AS1
AceView (NCBI)TTC39A-AS1
Genatlas (Paris)TTC39A-AS1
SOURCE (Princeton)TTC39A-AS1
Genetics Home Reference (NIH)TTC39A-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TTC39A-AS1  -     chr1:51329654-51331281 +  1p32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTC39A-AS1  -     1p32.3   [Description]    (hg19-Feb_2009)
GoldenPathTTC39A-AS1 - 1p32.3 [CytoView hg19]  TTC39A-AS1 - 1p32.3 [CytoView hg38]
Genome Data Viewer NCBITTC39A-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BF675965 CB128747
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TTC39A-AS1
Gene ExpressionTTC39A-AS1 [ NCBI-GEO ]   TTC39A-AS1 [ EBI - ARRAY_EXPRESS ]   TTC39A-AS1 [ SEEK ]   TTC39A-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TTC39A-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of TTC39A-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102724097
GTEX Portal (Tissue expression)TTC39A-AS1
Human Protein AtlasENSG00000261664-TTC39A-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTC39A-AS1
Human Protein Atlas [tissue]ENSG00000261664-TTC39A-AS1 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:27:19 CEST 2021

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