Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TTC3P1 (tetratricopeptide repeat domain 3 pseudogene 1)

Identity

Alias (NCBI)RNF105L
TTC3L
HGNC (Hugo) TTC3P1
HGNC Alias symbRNF105L
HGNC Previous nameTTC3L
HGNC Previous nametetratricopeptide repeat domain 3-like
LocusID (NCBI) 286495
Atlas_Id 75297
Location Xq13.3  [Link to chromosome band Xq13]
Location_base_pair Starts at 75740538 and ends at 75743079 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TTC3P1   23318
Cards
Entrez_Gene (NCBI)TTC3P1    tetratricopeptide repeat domain 3 pseudogene 1
AliasesRNF105L; TTC3L
GeneCards (Weizmann)TTC3P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chrX:75740538-75743079 [Contig_View]  TTC3P1 [Vega]
TCGA cBioPortalTTC3P1
AceView (NCBI)TTC3P1
Genatlas (Paris)TTC3P1
SOURCE (Princeton)TTC3P1
Genetics Home Reference (NIH)TTC3P1
Genomic and cartography
GoldenPath hg38 (UCSC)TTC3P1  -     chrX:75740538-75743079 -  Xq13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTC3P1  -     Xq13.3   [Description]    (hg19-Feb_2009)
GoldenPathTTC3P1 - Xq13.3 [CytoView hg19]  TTC3P1 - Xq13.3 [CytoView hg38]
Genome Data Viewer NCBITTC3P1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK304575 AY672106
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TTC3P1
Gene ExpressionTTC3P1 [ NCBI-GEO ]   TTC3P1 [ EBI - ARRAY_EXPRESS ]   TTC3P1 [ SEEK ]   TTC3P1 [ MEM ]
Gene Expression Viewer (FireBrowse)TTC3P1 [ Firebrowse - Broad ]
GenevisibleExpression of TTC3P1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)286495
GTEX Portal (Tissue expression)TTC3P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTC3P1
Protein Interaction databases
BioGRIDTTC3P1
STRING (EMBL)TTC3P1
ZODIACTTC3P1
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXTTC3P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:27:20 CEST 2021

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