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TTI2 (TELO2 interacting protein 2)

Identity

Alias_namesC8orf41
chromosome 8 open reading frame 41
Tel2 interacting protein 2 homolog (S. pombe)
Alias_symbol (synonym)FLJ23263
Other aliasMRT39
HGNC (Hugo) TTI2
LocusID (NCBI) 80185
Atlas_Id 75306
Location 8p12  [Link to chromosome band 8p12]
Location_base_pair Starts at 33498509 and ends at 33513185 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTI2   26262
Cards
Entrez_Gene (NCBI)TTI2  80185  TELO2 interacting protein 2
AliasesC8orf41; MRT39
GeneCards (Weizmann)TTI2
Ensembl hg19 (Hinxton)ENSG00000129696 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000129696 [Gene_View]  chr8:33498509-33513185 [Contig_View]  TTI2 [Vega]
ICGC DataPortalENSG00000129696
TCGA cBioPortalTTI2
AceView (NCBI)TTI2
Genatlas (Paris)TTI2
WikiGenes80185
SOURCE (Princeton)TTI2
Genetics Home Reference (NIH)TTI2
Genomic and cartography
GoldenPath hg38 (UCSC)TTI2  -     chr8:33498509-33513185 -  8p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTI2  -     8p12   [Description]    (hg19-Feb_2009)
EnsemblTTI2 - 8p12 [CytoView hg19]  TTI2 - 8p12 [CytoView hg38]
Mapping of homologs : NCBITTI2 [Mapview hg19]  TTI2 [Mapview hg38]
OMIM614426   615541   
Gene and transcription
Genbank (Entrez)AI890434 AK026916 AK308918 AL530920 BC007387
RefSeq transcript (Entrez)NM_001102401 NM_001265581 NM_001330505 NM_025115
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TTI2
Cluster EST : UnigeneHs.742048 [ NCBI ]
CGAP (NCI)Hs.742048
Alternative Splicing GalleryENSG00000129696
Gene ExpressionTTI2 [ NCBI-GEO ]   TTI2 [ EBI - ARRAY_EXPRESS ]   TTI2 [ SEEK ]   TTI2 [ MEM ]
Gene Expression Viewer (FireBrowse)TTI2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80185
GTEX Portal (Tissue expression)TTI2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6NXR4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6NXR4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6NXR4
Splice isoforms : SwissVarQ6NXR4
PhosPhoSitePlusQ6NXR4
Domains : Interpro (EBI)ARM-type_fold    Tti2   
Domain families : Pfam (Sanger)Tti2 (PF10521)   
Domain families : Pfam (NCBI)pfam10521   
Conserved Domain (NCBI)TTI2
DMDM Disease mutations80185
Blocks (Seattle)TTI2
SuperfamilyQ6NXR4
Human Protein AtlasENSG00000129696
Peptide AtlasQ6NXR4
HPRD13390
IPIIPI00306207   IPI00796624   IPI01013854   IPI00981157   IPI00980341   
Protein Interaction databases
DIP (DOE-UCLA)Q6NXR4
IntAct (EBI)Q6NXR4
FunCoupENSG00000129696
BioGRIDTTI2
STRING (EMBL)TTI2
ZODIACTTI2
Ontologies - Pathways
QuickGOQ6NXR4
Ontology : AmiGOnucleoplasm  centrosome  cytosol  
Ontology : EGO-EBInucleoplasm  centrosome  cytosol  
NDEx NetworkTTI2
Atlas of Cancer Signalling NetworkTTI2
Wikipedia pathwaysTTI2
Orthology - Evolution
OrthoDB80185
GeneTree (enSembl)ENSG00000129696
Phylogenetic Trees/Animal Genes : TreeFamTTI2
HOVERGENQ6NXR4
HOGENOMQ6NXR4
Homologs : HomoloGeneTTI2
Homology/Alignments : Family Browser (UCSC)TTI2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTTI2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TTI2
dbVarTTI2
ClinVarTTI2
1000_GenomesTTI2 
Exome Variant ServerTTI2
ExAC (Exome Aggregation Consortium)TTI2 (select the gene name)
Genetic variants : HAPMAP80185
Genomic Variants (DGV)TTI2 [DGVbeta]
DECIPHERTTI2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTTI2 
Mutations
ICGC Data PortalTTI2 
TCGA Data PortalTTI2 
Broad Tumor PortalTTI2
OASIS PortalTTI2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTTI2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TTI2
DgiDB (Drug Gene Interaction Database)TTI2
DoCM (Curated mutations)TTI2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TTI2 (select a term)
intoGenTTI2
Cancer3DTTI2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614426    615541   
Orphanet22601   
MedgenTTI2
Genetic Testing Registry TTI2
NextProtQ6NXR4 [Medical]
TSGene80185
GENETestsTTI2
Target ValidationTTI2
Huge Navigator TTI2 [HugePedia]
snp3D : Map Gene to Disease80185
BioCentury BCIQTTI2
ClinGenTTI2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80185
Chemical/Pharm GKB GenePA142672360
Clinical trialTTI2
Miscellaneous
canSAR (ICR)TTI2 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTI2
EVEXTTI2
GoPubMedTTI2
iHOPTTI2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:47:36 CEST 2017

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