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TTL (tubulin tyrosine ligase)

Identity

Other names-
HGNC (Hugo) TTL
LocusID (NCBI) 150465
Location 2q13
Location_base_pair Starts at 113239743 and ends at 113290222 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)TTL   21586
Cards
Entrez_Gene (NCBI)TTL  150465  tubulin tyrosine ligase
GeneCards (Weizmann)TTL
Ensembl (Hinxton) [Gene_View]  chr2:113239743-113290222 [Contig_View]  TTL [Vega]
AceView (NCBI)TTL
Genatlas (Paris)TTL
WikiGenes150465
SOURCE (Princeton)NM_153712
Genomic and cartography
GoldenPath (UCSC)TTL  -  2q13   chr2:113239743-113290222 +  2q13   [Description]    (hg19-Feb_2009)
EnsemblTTL - 2q13 [CytoView]
Mapping of homologs : NCBITTL [Mapview]
OMIM608291   
Gene and transcription
Genbank (Entrez)AA099055 AB071393 AK026673 AK126378 AK126549
RefSeq transcript (Entrez)NM_153712
RefSeq genomic (Entrez)AC_000134 NC_000002 NC_018913 NT_005403 NW_001838841 NW_004929304
Consensus coding sequences : CCDS (NCBI)TTL
Cluster EST : UnigeneHs.358997 [ NCBI ]
CGAP (NCI)Hs.358997
Gene ExpressionTTL [ NCBI-GEO ]     TTL [ SEEK ]   TTL [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NG68 (Uniprot)
NextProtQ8NG68  [Medical]
With graphics : InterProQ8NG68
Splice isoforms : SwissVarQ8NG68 (Swissvar)
Domaine pattern : Prosite (Expaxy)TTL (PS51221)   
Domains : Interpro (EBI)TTL/TTLL_fam   
Related proteins : CluSTrQ8NG68
Domain families : Pfam (Sanger)TTL (PF03133)   
Domain families : Pfam (NCBI)pfam03133   
DMDM Disease mutations150465
Blocks (Seattle)Q8NG68
Peptide AtlasQ8NG68
HPRD12206
IPIIPI00166611   
Protein Interaction databases
DIP (DOE-UCLA)Q8NG68
IntAct (EBI)Q8NG68
BioGRIDTTL
IntegromeDBTTL
STRING (EMBL)TTL
Ontologies - Pathways
QuickGOQ8NG68
Ontology : AmiGOmicrotubule cytoskeleton organization  tubulin-tyrosine ligase activity  ATP binding  cellular protein modification process  regulation of axon extension  
Ontology : EGO-EBImicrotubule cytoskeleton organization  tubulin-tyrosine ligase activity  ATP binding  cellular protein modification process  regulation of axon extension  
Protein Interaction DatabaseTTL
Wikipedia pathwaysTTL
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)TTL
SNP (GeneSNP Utah)TTL
SNP : HGBaseTTL
Genetic variants : HAPMAPTTL
1000_GenomesTTL 
CONAN: Copy Number AnalysisTTL 
Somatic Mutations in Cancer : COSMICTTL 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
DECIPHER (Syndromes)2:113239743-113290222
Mutations and Diseases : HGMDTTL
OMIM608291   
MedgenTTL
GENETestsTTL
Disease Genetic AssociationTTL
Huge Navigator TTL [HugePedia]  TTL [HugeCancerGEM]
Genomic VariantsTTL  TTL [DGVbeta]
Exome VariantTTL
dbVarTTL
ClinVarTTL
snp3D : Map Gene to Disease150465
General knowledge
Homologs : HomoloGeneTTL
Homology/Alignments : Family Browser (UCSC)TTL
Phylogenetic Trees/Animal Genes : TreeFamTTL
Chemical/Protein Interactions : CTD150465
Chemical/Pharm GKB GenePA134934330
Clinical trialTTL
Other databases
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
CoreMineTTL
GoPubMedTTL
iHOPTTL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2014Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Dec 3 16:40:23 CET 2014

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