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TTLL10 (tubulin tyrosine ligase like 10)

Identity

Alias (NCBI)TTLL5
HGNC (Hugo) TTLL10
HGNC Alias symbFLJ36119
HGNC Previous nameTTLL5
HGNC Previous nametubulin tyrosine ligase-like family, member 5
 tubulin tyrosine ligase-like family member 10
LocusID (NCBI) 254173
Atlas_Id 75308
Location 1p36.33  [Link to chromosome band 1p36]
Location_base_pair Starts at 1179681 and ends at 1185863 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TTLL10   26693
Cards
Entrez_Gene (NCBI)TTLL10    tubulin tyrosine ligase like 10
AliasesTTLL5
GeneCards (Weizmann)TTLL10
Ensembl hg19 (Hinxton)ENSG00000162571 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000162571 [Gene_View]  ENSG00000162571 [Sequence]  chr1:1179681-1185863 [Contig_View]  TTLL10 [Vega]
ICGC DataPortalENSG00000162571
TCGA cBioPortalTTLL10
AceView (NCBI)TTLL10
Genatlas (Paris)TTLL10
SOURCE (Princeton)TTLL10
Genetics Home Reference (NIH)TTLL10
Genomic and cartography
GoldenPath hg38 (UCSC)TTLL10  -     chr1:1179681-1185863 +  1p36.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTLL10  -     1p36.33   [Description]    (hg19-Feb_2009)
GoldenPathTTLL10 - 1p36.33 [CytoView hg19]  TTLL10 - 1p36.33 [CytoView hg38]
ImmunoBaseENSG00000162571
Genome Data Viewer NCBITTLL10 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK093438 AK124125 BC027945 BC126152 BC126154
RefSeq transcript (Entrez)NM_001130045 NM_001371649 NM_153254
Consensus coding sequences : CCDS (NCBI)TTLL10
Gene ExpressionTTLL10 [ NCBI-GEO ]   TTLL10 [ EBI - ARRAY_EXPRESS ]   TTLL10 [ SEEK ]   TTLL10 [ MEM ]
Gene Expression Viewer (FireBrowse)TTLL10 [ Firebrowse - Broad ]
GenevisibleExpression of TTLL10 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)254173
GTEX Portal (Tissue expression)TTLL10
Human Protein AtlasENSG00000162571-TTLL10 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZVT0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZVT0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZVT0
PhosPhoSitePlusQ6ZVT0
Domaine pattern : Prosite (Expaxy)TTL (PS51221)   
Domains : Interpro (EBI)TTL/TTLL_fam    TTLL10   
Domain families : Pfam (Sanger)TTL (PF03133)   
Domain families : Pfam (NCBI)pfam03133   
Conserved Domain (NCBI)TTLL10
SuperfamilyQ6ZVT0
AlphaFold pdb e-kbQ6ZVT0   
Human Protein Atlas [tissue]ENSG00000162571-TTLL10 [tissue]
HPRD08771
Protein Interaction databases
DIP (DOE-UCLA)Q6ZVT0
IntAct (EBI)Q6ZVT0
BioGRIDTTLL10
STRING (EMBL)TTLL10
ZODIACTTLL10
Ontologies - Pathways
QuickGOQ6ZVT0
Ontology : AmiGOprotein binding  ATP binding  cytosol  protein polyglycylation  protein polyglycylation  protein-glycine ligase activity  
Ontology : EGO-EBIprotein binding  ATP binding  cytosol  protein polyglycylation  protein polyglycylation  protein-glycine ligase activity  
NDEx NetworkTTLL10
Atlas of Cancer Signalling NetworkTTLL10
Wikipedia pathwaysTTLL10
Orthology - Evolution
OrthoDB254173
GeneTree (enSembl)ENSG00000162571
Phylogenetic Trees/Animal Genes : TreeFamTTLL10
Homologs : HomoloGeneTTLL10
Homology/Alignments : Family Browser (UCSC)TTLL10
Gene fusions - Rearrangements
Fusion : QuiverTTLL10
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTTLL10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TTLL10
dbVarTTLL10
ClinVarTTLL10
MonarchTTLL10
1000_GenomesTTLL10 
Exome Variant ServerTTLL10
GNOMAD BrowserENSG00000162571
Varsome BrowserTTLL10
ACMGTTLL10 variants
VarityQ6ZVT0
Genomic Variants (DGV)TTLL10 [DGVbeta]
DECIPHERTTLL10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTTLL10 
Mutations
ICGC Data PortalTTLL10 
TCGA Data PortalTTLL10 
Broad Tumor PortalTTLL10
OASIS PortalTTLL10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTTLL10  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTTLL10
Mutations and Diseases : HGMDTTLL10
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTTLL10
DgiDB (Drug Gene Interaction Database)TTLL10
DoCM (Curated mutations)TTLL10
CIViC (Clinical Interpretations of Variants in Cancer)TTLL10
Cancer3DTTLL10
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTTLL10
MedgenTTLL10
Genetic Testing Registry TTLL10
NextProtQ6ZVT0 [Medical]
GENETestsTTLL10
Target ValidationTTLL10
Huge Navigator TTLL10 [HugePedia]
ClinGenTTLL10
Clinical trials, drugs, therapy
MyCancerGenomeTTLL10
Protein Interactions : CTDTTLL10
Pharm GKB GenePA142670679
PharosQ6ZVT0
Clinical trialTTLL10
Miscellaneous
canSAR (ICR)TTLL10
HarmonizomeTTLL10
DataMed IndexTTLL10
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTTLL10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:27:22 CEST 2021

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