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TTTY1 (testis-specific transcript, Y-linked 1 (non-protein coding))

Identity

Alias_namestestis-specific transcript, Y-linked 1
Alias_symbol (synonym)TTY1
NCRNA00033
LINC00033
Other alias
HGNC (Hugo) TTTY1
LocusID (NCBI) 50858
Atlas_Id 75321
Location Yp11.2  [Link to chromosome band Yp11]
Location_base_pair Starts at 6390401 and ends at 6411564 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTTY1   14022
Cards
Entrez_Gene (NCBI)TTTY1  50858  testis-specific transcript, Y-linked 1 (non-protein coding)
AliasesLINC00033; NCRNA00033; TTY1
GeneCards (Weizmann)TTTY1
Ensembl hg19 (Hinxton)ENSG00000129845 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000129845 [Gene_View]  chrY:6390401-6411564 [Contig_View]  TTTY1 [Vega]
ICGC DataPortalENSG00000129845
TCGA cBioPortalTTTY1
AceView (NCBI)TTTY1
Genatlas (Paris)TTTY1
WikiGenes50858
SOURCE (Princeton)TTTY1
Genetics Home Reference (NIH)TTTY1
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY1  -     chrY:6390401-6411564 +  Yp11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY1  -     Yp11.2   [Description]    (hg19-Feb_2009)
EnsemblTTTY1 - Yp11.2 [CytoView hg19]  TTTY1 - Yp11.2 [CytoView hg38]
Mapping of homologs : NCBITTTY1 [Mapview hg19]  TTTY1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB035198
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY1
Cluster EST : UnigeneHs.722842 [ NCBI ]
CGAP (NCI)Hs.722842
Alternative Splicing GalleryENSG00000129845
Gene ExpressionTTTY1 [ NCBI-GEO ]   TTTY1 [ EBI - ARRAY_EXPRESS ]   TTTY1 [ SEEK ]   TTTY1 [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)50858
GTEX Portal (Tissue expression)TTTY1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY1
DMDM Disease mutations50858
Blocks (Seattle)TTTY1
Human Protein AtlasENSG00000129845
Protein Interaction databases
FunCoupENSG00000129845
BioGRIDTTTY1
STRING (EMBL)TTTY1
ZODIACTTTY1
Ontologies - Pathways
Huge Navigator TTTY1 [HugePedia]
snp3D : Map Gene to Disease50858
BioCentury BCIQTTTY1
ClinGenTTTY1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD50858
Chemical/Pharm GKB GenePA37835
Clinical trialTTTY1
Miscellaneous
canSAR (ICR)TTTY1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTTY1
EVEXTTTY1
GoPubMedTTTY1
iHOPTTTY1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:42:54 CEST 2017

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