Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TTTY15 (testis-specific transcript, Y-linked 15 (non-protein coding))

Identity

Alias_namestestis-specific transcript
Alias_symbol (synonym)DKFZP434I143
NCRNA00138
Other alias
HGNC (Hugo) TTTY15
LocusID (NCBI) 64595
Atlas_Id 54737
Location Yq11.221  [Link to chromosome band Yq11]
Location_base_pair Starts at 12662367 and ends at 12692224 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
TTTY15 (Yq11.21) / USP9Y (Yq11.21)USP9Y (Yq11.21) / TTTY15 (Yq11.21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTTY15   18567
Cards
Entrez_Gene (NCBI)TTTY15  64595  testis-specific transcript, Y-linked 15 (non-protein coding)
AliasesNCRNA00138
GeneCards (Weizmann)TTTY15
Ensembl hg19 (Hinxton)ENSG00000233864 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233864 [Gene_View]  chrY:12662367-12692224 [Contig_View]  TTTY15 [Vega]
ICGC DataPortalENSG00000233864
TCGA cBioPortalTTTY15
AceView (NCBI)TTTY15
Genatlas (Paris)TTTY15
WikiGenes64595
SOURCE (Princeton)TTTY15
Genetics Home Reference (NIH)TTTY15
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY15  -     chrY:12662367-12692224 +  Yq11.221   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY15  -     Yq11.221   [Description]    (hg19-Feb_2009)
EnsemblTTTY15 - Yq11.221 [CytoView hg19]  TTTY15 - Yq11.221 [CytoView hg38]
Mapping of homologs : NCBITTTY15 [Mapview hg19]  TTTY15 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL080135
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY15
Cluster EST : UnigeneHs.433656 [ NCBI ]
CGAP (NCI)Hs.433656
Alternative Splicing GalleryENSG00000233864
Gene ExpressionTTTY15 [ NCBI-GEO ]   TTTY15 [ EBI - ARRAY_EXPRESS ]   TTTY15 [ SEEK ]   TTTY15 [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)64595
GTEX Portal (Tissue expression)TTTY15
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY15
DMDM Disease mutations64595
Blocks (Seattle)TTTY15
Human Protein AtlasENSG00000233864
Protein Interaction databases
FunCoupENSG00000233864
BioGRIDTTTY15
STRING (EMBL)TTTY15
ZODIACTTTY15
Ontologies - Pathways
Huge Navigator TTTY15 [HugePedia]
snp3D : Map Gene to Disease64595
BioCentury BCIQTTTY15
ClinGenTTTY15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64595
Chemical/Pharm GKB GenePA38579
Clinical trialTTTY15
Miscellaneous
canSAR (ICR)TTTY15 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTTY15
EVEXTTTY15
GoPubMedTTTY15
iHOPTTTY15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 12:42:41 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.