Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TTTY17C (testis-specific transcript, Y-linked 17C)


Alias (NCBI)NCRNA00142
HGNC Alias symbNCRNA00142
HGNC Alias namenon-protein coding RNA 142
HGNC Previous nametestis-specific transcript, Y-linked 17C
LocusID (NCBI) 474152
Atlas_Id 75330
Location Yq11.223  [Link to chromosome band Yq11]
Location_base_pair Starts at 22851584 and ends at 22852715 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)TTTY17C   31890
Entrez_Gene (NCBI)TTTY17C    testis-specific transcript, Y-linked 17C
GeneCards (Weizmann)TTTY17C
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chrY:22851584-22852715 [Contig_View]  TTTY17C [Vega]
TCGA cBioPortalTTTY17C
Genatlas (Paris)TTTY17C
SOURCE (Princeton)TTTY17C
Genetics Home Reference (NIH)TTTY17C
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY17C  -     chrY:22851584-22852715 +  Yq11.223   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY17C  -     Yq11.223   [Description]    (hg19-Feb_2009)
GoldenPathTTTY17C - Yq11.223 [CytoView hg19]  TTTY17C - Yq11.223 [CytoView hg38]
Genome Data Viewer NCBITTTY17C [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY17C
Gene ExpressionTTTY17C [ NCBI-GEO ]   TTTY17C [ EBI - ARRAY_EXPRESS ]   TTTY17C [ SEEK ]   TTTY17C [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY17C [ Firebrowse - Broad ]
GenevisibleExpression of TTTY17C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)474152
GTEX Portal (Tissue expression)TTTY17C
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY17C
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:27:26 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us