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TTTY20 (testis-specific transcript, Y-linked 20)

Identity

Alias (NCBI)NCRNA00145
HGNC (Hugo) TTTY20
HGNC Alias symbNCRNA00145
HGNC Alias namenon-protein coding RNA 145
HGNC Previous nametestis-specific transcript, Y-linked 20
LocusID (NCBI) 252951
Atlas_Id 75335
Location Yp11.2  [Link to chromosome band Yp11]
Location_base_pair Starts at 9329880 and ends at 9334832 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TTTY20   18844
Cards
Entrez_Gene (NCBI)TTTY20    testis-specific transcript, Y-linked 20
AliasesNCRNA00145
GeneCards (Weizmann)TTTY20
Ensembl hg19 (Hinxton)ENSG00000232808 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232808 [Gene_View]  ENSG00000232808 [Sequence]  chrY:9329880-9334832 [Contig_View]  TTTY20 [Vega]
ICGC DataPortalENSG00000232808
TCGA cBioPortalTTTY20
AceView (NCBI)TTTY20
Genatlas (Paris)TTTY20
SOURCE (Princeton)TTTY20
Genetics Home Reference (NIH)TTTY20
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY20  -     chrY:9329880-9334832 -  Yp11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY20  -     Yp11.2   [Description]    (hg19-Feb_2009)
GoldenPathTTTY20 - Yp11.2 [CytoView hg19]  TTTY20 - Yp11.2 [CytoView hg38]
ImmunoBaseENSG00000232808
Genome Data Viewer NCBITTTY20 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF527832
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY20
Gene ExpressionTTTY20 [ NCBI-GEO ]   TTTY20 [ EBI - ARRAY_EXPRESS ]   TTTY20 [ SEEK ]   TTTY20 [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY20 [ Firebrowse - Broad ]
GenevisibleExpression of TTTY20 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)252951
GTEX Portal (Tissue expression)TTTY20
Human Protein AtlasENSG00000232808-TTTY20 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY20
Human Protein Atlas [tissue]ENSG00000232808-TTTY20 [tissue]
Protein Interaction databases
BioGRIDTTTY20
STRING (EMBL)TTTY20
ZODIACTTTY20
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTTTY20
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:27:27 CEST 2021

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