Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TTTY20 (testis-specific transcript, Y-linked 20 (non-protein coding))

Identity

Alias_namestestis-specific transcript, Y-linked 20
Alias_symbol (synonym)NCRNA00145
Other alias
HGNC (Hugo) TTTY20
LocusID (NCBI) 252951
Atlas_Id 75335
Location Yp11.2  [Link to chromosome band Yp11]
Location_base_pair Starts at 9329880 and ends at 9334832 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA'RA

 


External links

Nomenclature
HGNC (Hugo)TTTY20   18844
Cards
Entrez_Gene (NCBI)TTTY20  252951  testis-specific transcript, Y-linked 20 (non-protein coding)
AliasesNCRNA00145
GeneCards (Weizmann)TTTY20
Ensembl hg19 (Hinxton)ENSG00000232808 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232808 [Gene_View]  chrY:9329880-9334832 [Contig_View]  TTTY20 [Vega]
ICGC DataPortalENSG00000232808
TCGA cBioPortalTTTY20
AceView (NCBI)TTTY20
Genatlas (Paris)TTTY20
WikiGenes252951
SOURCE (Princeton)TTTY20
Genetics Home Reference (NIH)TTTY20
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY20  -     chrY:9329880-9334832 -  Yp11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY20  -     Yp11.2   [Description]    (hg19-Feb_2009)
EnsemblTTTY20 - Yp11.2 [CytoView hg19]  TTTY20 - Yp11.2 [CytoView hg38]
Mapping of homologs : NCBITTTY20 [Mapview hg19]  TTTY20 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF527832
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY20
Cluster EST : UnigeneHs.632292 [ NCBI ]
CGAP (NCI)Hs.632292
Alternative Splicing GalleryENSG00000232808
Gene ExpressionTTTY20 [ NCBI-GEO ]   TTTY20 [ EBI - ARRAY_EXPRESS ]   TTTY20 [ SEEK ]   TTTY20 [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY20 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)252951
GTEX Portal (Tissue expression)TTTY20
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY20
DMDM Disease mutations252951
Blocks (Seattle)TTTY20
Human Protein AtlasENSG00000232808
IPIIPI00942901   IPI01012053   
Protein Interaction databases
FunCoupENSG00000232808
BioGRIDTTTY20
STRING (EMBL)TTTY20
ZODIACTTTY20
Ontologies - Pathways
Huge Navigator TTTY20 [HugePedia]
snp3D : Map Gene to Disease252951
BioCentury BCIQTTTY20
ClinGenTTTY20
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD252951
Chemical/Pharm GKB GenePA38707
Clinical trialTTTY20
Miscellaneous
canSAR (ICR)TTTY20 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTTY20
EVEXTTTY20
GoPubMedTTTY20
iHOPTTTY20
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:42:56 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.