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TTTY21 (testis-specific transcript, Y-linked 21 (non-protein coding))

Identity

Alias_namestestis-specific transcript, Y-linked 21
Alias_symbol (synonym)NCRNA00146
Other alias
HGNC (Hugo) TTTY21
LocusID (NCBI) 252953
Atlas_Id 75336
Location Yp11.2  [Link to chromosome band Yp11]
Location_base_pair Starts at 6443434 and ends at 6447077 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTTY21   18845
Cards
Entrez_Gene (NCBI)TTTY21  252953  testis-specific transcript, Y-linked 21 (non-protein coding)
AliasesNCRNA00146
GeneCards (Weizmann)TTTY21
Ensembl hg19 (Hinxton)ENSG00000228890 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228890 [Gene_View]  chrY:6443434-6447077 [Contig_View]  TTTY21 [Vega]
ICGC DataPortalENSG00000228890
TCGA cBioPortalTTTY21
AceView (NCBI)TTTY21
Genatlas (Paris)TTTY21
WikiGenes252953
SOURCE (Princeton)TTTY21
Genetics Home Reference (NIH)TTTY21
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY21  -     chrY:6443434-6447077 +  Yp11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY21  -     Yp11.2   [Description]    (hg19-Feb_2009)
EnsemblTTTY21 - Yp11.2 [CytoView hg19]  TTTY21 - Yp11.2 [CytoView hg38]
Mapping of homologs : NCBITTTY21 [Mapview hg19]  TTTY21 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF527833
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY21
Cluster EST : UnigeneHs.522847 [ NCBI ]
CGAP (NCI)Hs.522847
Alternative Splicing GalleryENSG00000228890
Gene ExpressionTTTY21 [ NCBI-GEO ]   TTTY21 [ EBI - ARRAY_EXPRESS ]   TTTY21 [ SEEK ]   TTTY21 [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY21 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)252953
GTEX Portal (Tissue expression)TTTY21
Human Protein AtlasENSG00000228890-TTTY21 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY21
DMDM Disease mutations252953
Blocks (Seattle)TTTY21
Human Protein Atlas [tissue]ENSG00000228890-TTTY21 [tissue]
Protein Interaction databases
FunCoupENSG00000228890
BioGRIDTTTY21
STRING (EMBL)TTTY21
ZODIACTTTY21
Ontologies - Pathways
Huge Navigator TTTY21 [HugePedia]
snp3D : Map Gene to Disease252953
BioCentury BCIQTTTY21
ClinGenTTTY21
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD252953
Chemical/Pharm GKB GenePA38708
Clinical trialTTTY21
Miscellaneous
canSAR (ICR)TTTY21 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTTY21
EVEXTTTY21
GoPubMedTTTY21
iHOPTTTY21
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:01:15 CET 2017

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