Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TTTY22 (testis-specific transcript, Y-linked 22 (non-protein coding))

Identity

Alias_namestestis-specific transcript, Y-linked 22
Alias_symbol (synonym)NCRNA00147
Other alias
HGNC (Hugo) TTTY22
LocusID (NCBI) 252954
Atlas_Id 75338
Location Yp11.2  [Link to chromosome band Yp11]
Location_base_pair Starts at 9801153 and ends at 9813245 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTTY22   18846
Cards
Entrez_Gene (NCBI)TTTY22  252954  testis-specific transcript, Y-linked 22 (non-protein coding)
AliasesNCRNA00147
GeneCards (Weizmann)TTTY22
Ensembl hg19 (Hinxton)ENSG00000224075 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224075 [Gene_View]  chrY:9801153-9813245 [Contig_View]  TTTY22 [Vega]
ICGC DataPortalENSG00000224075
TCGA cBioPortalTTTY22
AceView (NCBI)TTTY22
Genatlas (Paris)TTTY22
WikiGenes252954
SOURCE (Princeton)TTTY22
Genetics Home Reference (NIH)TTTY22
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY22  -     chrY:9801153-9813245 +  Yp11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY22  -     Yp11.2   [Description]    (hg19-Feb_2009)
EnsemblTTTY22 - Yp11.2 [CytoView hg19]  TTTY22 - Yp11.2 [CytoView hg38]
Mapping of homologs : NCBITTTY22 [Mapview hg19]  TTTY22 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF527834
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY22
Cluster EST : UnigeneHs.511961 [ NCBI ]
CGAP (NCI)Hs.511961
Alternative Splicing GalleryENSG00000224075
Gene ExpressionTTTY22 [ NCBI-GEO ]   TTTY22 [ EBI - ARRAY_EXPRESS ]   TTTY22 [ SEEK ]   TTTY22 [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY22 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)252954
GTEX Portal (Tissue expression)TTTY22
Human Protein AtlasENSG00000224075-TTTY22 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY22
DMDM Disease mutations252954
Blocks (Seattle)TTTY22
Human Protein Atlas [tissue]ENSG00000224075-TTTY22 [tissue]
Protein Interaction databases
FunCoupENSG00000224075
BioGRIDTTTY22
STRING (EMBL)TTTY22
ZODIACTTTY22
Ontologies - Pathways
Huge Navigator TTTY22 [HugePedia]
snp3D : Map Gene to Disease252954
BioCentury BCIQTTTY22
ClinGenTTTY22
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD252954
Chemical/Pharm GKB GenePA38709
Clinical trialTTTY22
Miscellaneous
canSAR (ICR)TTTY22 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTTY22
EVEXTTTY22
GoPubMedTTTY22
iHOPTTTY22
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:01:16 CET 2017

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