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TTTY3B (testis-specific transcript, Y-linked 3B)

Identity

Alias (NCBI)LNCRNA00122
NCRNA00122
HGNC (Hugo) TTTY3B
HGNC Alias symbLNCRNA00122
HGNC Alias namelong intergenic non-protein coding RNA 122
HGNC Previous nametestis-specific transcript, Y-linked 3B
LocusID (NCBI) 474148
Atlas_Id 75343
Location Yq11.23  [Link to chromosome band Yq11]
Location_base_pair Starts at 23936727 and ends at 23941622 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TTTY3B   31888
Cards
Entrez_Gene (NCBI)TTTY3B    testis-specific transcript, Y-linked 3B
AliasesLNCRNA00122; NCRNA00122
GeneCards (Weizmann)TTTY3B
Ensembl hg19 (Hinxton)ENSG00000280961 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280961 [Gene_View]  ENSG00000280961 [Sequence]  chrY:23936727-23941622 [Contig_View]  TTTY3B [Vega]
ICGC DataPortalENSG00000280961
TCGA cBioPortalTTTY3B
AceView (NCBI)TTTY3B
Genatlas (Paris)TTTY3B
SOURCE (Princeton)TTTY3B
Genetics Home Reference (NIH)TTTY3B
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY3B  -     chrY:23936727-23941622 -  Yq11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY3B  -     Yq11.23   [Description]    (hg19-Feb_2009)
GoldenPathTTTY3B - Yq11.23 [CytoView hg19]  TTTY3B - Yq11.23 [CytoView hg38]
ImmunoBaseENSG00000280961
Genome Data Viewer NCBITTTY3B [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY3B
Gene ExpressionTTTY3B [ NCBI-GEO ]   TTTY3B [ EBI - ARRAY_EXPRESS ]   TTTY3B [ SEEK ]   TTTY3B [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY3B [ Firebrowse - Broad ]
GenevisibleExpression of TTTY3B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)474148
GTEX Portal (Tissue expression)TTTY3B
Human Protein AtlasENSG00000280961-TTTY3B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY3B
Human Protein Atlas [tissue]ENSG00000280961-TTTY3B [tissue]
Protein Interaction databases
BioGRIDTTTY3B
STRING (EMBL)TTTY3B
ZODIACTTTY3B
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTTTY3B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:27:29 CEST 2021

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