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TTTY4 (testis-specific transcript, Y-linked 4)

Identity

Alias (NCBI)LINC00123
NCRNA00123
TTTY4A
TTY4
HGNC (Hugo) TTTY4
HGNC Alias symbTTY4
TTTY4A
LINC00123
HGNC Alias namelong intergenic non-protein coding RNA 123
HGNC Previous nametestis-specific transcript, Y-linked 4
LocusID (NCBI) 114761
Atlas_Id 75344
Location Yq11.223  [Link to chromosome band Yq11]
Location_base_pair Starts at 22936455 and ends at 22973284 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TTTY4   16481
Cards
Entrez_Gene (NCBI)TTTY4    testis-specific transcript, Y-linked 4
AliasesLINC00123; NCRNA00123; TTTY4A; TTY4
GeneCards (Weizmann)TTTY4
Ensembl hg19 (Hinxton)ENSG00000226906 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226906 [Gene_View]  ENSG00000226906 [Sequence]  chrY:22936455-22973284 [Contig_View]  TTTY4 [Vega]
ICGC DataPortalENSG00000226906
TCGA cBioPortalTTTY4
AceView (NCBI)TTTY4
Genatlas (Paris)TTTY4
SOURCE (Princeton)TTTY4
Genetics Home Reference (NIH)TTTY4
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY4  -     chrY:22936455-22973284 +  Yq11.223   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY4  -     Yq11.223   [Description]    (hg19-Feb_2009)
GoldenPathTTTY4 - Yq11.223 [CytoView hg19]  TTTY4 - Yq11.223 [CytoView hg38]
ImmunoBaseENSG00000226906
Genome Data Viewer NCBITTTY4 [Mapview hg19]  
OMIM400037   
Gene and transcription
Genbank (Entrez)AF332231
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY4
Gene ExpressionTTTY4 [ NCBI-GEO ]   TTTY4 [ EBI - ARRAY_EXPRESS ]   TTTY4 [ SEEK ]   TTTY4 [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY4 [ Firebrowse - Broad ]
GenevisibleExpression of TTTY4 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)114761
GTEX Portal (Tissue expression)TTTY4
Human Protein AtlasENSG00000226906-TTTY4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY4
Human Protein Atlas [tissue]ENSG00000226906-TTTY4 [tissue]
Protein Interaction databases
BioGRIDTTTY4
STRING (EMBL)TTTY4
ZODIACTTTY4
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTTTY4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:27:29 CEST 2021

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