Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TTTY4B (testis-specific transcript, Y-linked 4B (non-protein coding))

Identity

Alias_namestestis-specific transcript, Y-linked 4B
Alias_symbol (synonym)LINC00124
Other aliasNCRNA00124
HGNC (Hugo) TTTY4B
LocusID (NCBI) 474149
Atlas_Id 75345
Location Yq11.223  [Link to chromosome band Yq11]
Location_base_pair Starts at 22936455 and ends at 22973284 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTTY4B   31891
Cards
Entrez_Gene (NCBI)TTTY4B  474149  testis-specific transcript, Y-linked 4B (non-protein coding)
AliasesLINC00124; NCRNA00124
GeneCards (Weizmann)TTTY4B
Ensembl hg19 (Hinxton)ENSG00000235412 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235412 [Gene_View]  chrY:22936455-22973284 [Contig_View]  TTTY4B [Vega]
ICGC DataPortalENSG00000235412
TCGA cBioPortalTTTY4B
AceView (NCBI)TTTY4B
Genatlas (Paris)TTTY4B
WikiGenes474149
SOURCE (Princeton)TTTY4B
Genetics Home Reference (NIH)TTTY4B
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY4B  -     chrY:22936455-22973284 +  Yq11.223   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY4B  -     Yq11.223   [Description]    (hg19-Feb_2009)
EnsemblTTTY4B - Yq11.223 [CytoView hg19]  TTTY4B - Yq11.223 [CytoView hg38]
Mapping of homologs : NCBITTTY4B [Mapview hg19]  TTTY4B [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY4B
Cluster EST : UnigeneHs.679521 [ NCBI ]
CGAP (NCI)Hs.679521
Alternative Splicing GalleryENSG00000235412
Gene ExpressionTTTY4B [ NCBI-GEO ]   TTTY4B [ EBI - ARRAY_EXPRESS ]   TTTY4B [ SEEK ]   TTTY4B [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY4B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)474149
GTEX Portal (Tissue expression)TTTY4B
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY4B
DMDM Disease mutations474149
Blocks (Seattle)TTTY4B
Human Protein AtlasENSG00000235412
Protein Interaction databases
FunCoupENSG00000235412
BioGRIDTTTY4B
STRING (EMBL)TTTY4B
ZODIACTTTY4B
Ontologies - Pathways
Huge Navigator TTTY4B [HugePedia]
snp3D : Map Gene to Disease474149
BioCentury BCIQTTTY4B
ClinGenTTTY4B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD474149
Chemical/Pharm GKB GenePA134861789
Clinical trialTTTY4B
Miscellaneous
canSAR (ICR)TTTY4B (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTTY4B
EVEXTTTY4B
GoPubMedTTTY4B
iHOPTTTY4B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:42:58 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.