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TTTY4C (testis-specific transcript, Y-linked 4C)

Identity

Alias (NCBI)LINC00125
NCRNA00125
HGNC (Hugo) TTTY4C
HGNC Alias symbLINC00125
HGNC Alias namelong intergenic non-protein coding RNA 125
HGNC Previous nametestis-specific transcript, Y-linked 4C
LocusID (NCBI) 474150
Atlas_Id 75346
Location Yq11.223  [Link to chromosome band Yq11]
Location_base_pair Starts at 22936455 and ends at 22973284 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TTTY4C   31892
Cards
Entrez_Gene (NCBI)TTTY4C    testis-specific transcript, Y-linked 4C
AliasesLINC00125; NCRNA00125
GeneCards (Weizmann)TTTY4C
Ensembl hg19 (Hinxton)ENSG00000228296 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228296 [Gene_View]  ENSG00000228296 [Sequence]  chrY:22936455-22973284 [Contig_View]  TTTY4C [Vega]
ICGC DataPortalENSG00000228296
TCGA cBioPortalTTTY4C
AceView (NCBI)TTTY4C
Genatlas (Paris)TTTY4C
SOURCE (Princeton)TTTY4C
Genetics Home Reference (NIH)TTTY4C
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY4C  -     chrY:22936455-22973284 +  Yq11.223   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY4C  -     Yq11.223   [Description]    (hg19-Feb_2009)
GoldenPathTTTY4C - Yq11.223 [CytoView hg19]  TTTY4C - Yq11.223 [CytoView hg38]
ImmunoBaseENSG00000228296
Genome Data Viewer NCBITTTY4C [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY4C
Gene ExpressionTTTY4C [ NCBI-GEO ]   TTTY4C [ EBI - ARRAY_EXPRESS ]   TTTY4C [ SEEK ]   TTTY4C [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY4C [ Firebrowse - Broad ]
GenevisibleExpression of TTTY4C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)474150
GTEX Portal (Tissue expression)TTTY4C
Human Protein AtlasENSG00000228296-TTTY4C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY4C
Human Protein Atlas [tissue]ENSG00000228296-TTTY4C [tissue]
Protein Interaction databases
BioGRIDTTTY4C
STRING (EMBL)TTTY4C
ZODIACTTTY4C
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTTTY4C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:27:29 CEST 2021

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