Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TTTY4C (testis-specific transcript, Y-linked 4C (non-protein coding))

Identity

Alias_namestestis-specific transcript, Y-linked 4C
Alias_symbol (synonym)LINC00125
Other aliasNCRNA00125
HGNC (Hugo) TTTY4C
LocusID (NCBI) 474150
Atlas_Id 75346
Location Yq11.223  [Link to chromosome band Yq11]
Location_base_pair Starts at 25082602 and ends at 25119431 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTTY4C   31892
Cards
Entrez_Gene (NCBI)TTTY4C  474150  testis-specific transcript, Y-linked 4C (non-protein coding)
AliasesLINC00125; NCRNA00125
GeneCards (Weizmann)TTTY4C
Ensembl hg19 (Hinxton)ENSG00000228296 [Gene_View]  chrY:25082602-25119431 [Contig_View]  TTTY4C [Vega]
Ensembl hg38 (Hinxton)ENSG00000228296 [Gene_View]  chrY:25082602-25119431 [Contig_View]  TTTY4C [Vega]
ICGC DataPortalENSG00000228296
TCGA cBioPortalTTTY4C
AceView (NCBI)TTTY4C
Genatlas (Paris)TTTY4C
WikiGenes474150
SOURCE (Princeton)TTTY4C
Genetics Home Reference (NIH)TTTY4C
Genomic and cartography
GoldenPath hg19 (UCSC)TTTY4C  -     chrY:25082602-25119431 +  Yq11.223   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TTTY4C  -     Yq11.223   [Description]    (hg38-Dec_2013)
EnsemblTTTY4C - Yq11.223 [CytoView hg19]  TTTY4C - Yq11.223 [CytoView hg38]
Mapping of homologs : NCBITTTY4C [Mapview hg19]  TTTY4C [Mapview hg38]
Gene and transcription
Genbank (Entrez)HG512880
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000024 NG_004755 NT_011903
Consensus coding sequences : CCDS (NCBI)TTTY4C
Cluster EST : UnigeneHs.742604 [ NCBI ]
CGAP (NCI)Hs.742604
Alternative Splicing GalleryENSG00000228296
Gene ExpressionTTTY4C [ NCBI-GEO ]   TTTY4C [ EBI - ARRAY_EXPRESS ]   TTTY4C [ SEEK ]   TTTY4C [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY4C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)474150
GTEX Portal (Tissue expression)TTTY4C
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY4C
DMDM Disease mutations474150
Blocks (Seattle)TTTY4C
Human Protein AtlasENSG00000228296
Protein Interaction databases
FunCoupENSG00000228296
BioGRIDTTTY4C
STRING (EMBL)TTTY4C
ZODIACTTTY4C
Ontologies - Pathways
Huge Navigator TTTY4C [HugePedia]
snp3D : Map Gene to Disease474150
BioCentury BCIQTTTY4C
ClinGenTTTY4C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD474150
Chemical/Pharm GKB GenePA134910504
Clinical trialTTTY4C
Miscellaneous
canSAR (ICR)TTTY4C (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTTY4C
EVEXTTTY4C
GoPubMedTTTY4C
iHOPTTTY4C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:50:22 CET 2017

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