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TTTY6 (testis-specific transcript, Y-linked 6)

Identity

Alias (NCBI)LINC00127
NCRNA00127
TTTY6A
TTY6
HGNC (Hugo) TTTY6
HGNC Alias symbTTY6
TTTY6A
LINC00127
HGNC Alias namelong intergenic non-protein coding RNA 127
HGNC Previous nametestis-specific transcript, Y-linked 6
LocusID (NCBI) 84672
Atlas_Id 75348
Location Yq11.223  [Link to chromosome band Yq11]
Location_base_pair Starts at 22144965 and ends at 22146831 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TTTY6   16483
Cards
Entrez_Gene (NCBI)TTTY6    testis-specific transcript, Y-linked 6
AliasesLINC00127; NCRNA00127; TTTY6A; TTY6
GeneCards (Weizmann)TTTY6
Ensembl hg19 (Hinxton)ENSG00000131538 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000131538 [Gene_View]  ENSG00000131538 [Sequence]  chrY:22144965-22146831 [Contig_View]  TTTY6 [Vega]
ICGC DataPortalENSG00000131538
TCGA cBioPortalTTTY6
AceView (NCBI)TTTY6
Genatlas (Paris)TTTY6
SOURCE (Princeton)TTTY6
Genetics Home Reference (NIH)TTTY6
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY6  -     chrY:22144965-22146831 +  Yq11.223   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY6  -     Yq11.223   [Description]    (hg19-Feb_2009)
GoldenPathTTTY6 - Yq11.223 [CytoView hg19]  TTTY6 - Yq11.223 [CytoView hg38]
ImmunoBaseENSG00000131538
Genome Data Viewer NCBITTTY6 [Mapview hg19]  
OMIM400039   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY6
Gene ExpressionTTTY6 [ NCBI-GEO ]   TTTY6 [ EBI - ARRAY_EXPRESS ]   TTTY6 [ SEEK ]   TTTY6 [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY6 [ Firebrowse - Broad ]
GenevisibleExpression of TTTY6 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84672
GTEX Portal (Tissue expression)TTTY6
Human Protein AtlasENSG00000131538-TTTY6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY6
Human Protein Atlas [tissue]ENSG00000131538-TTTY6 [tissue]
Protein Interaction databases
BioGRIDTTTY6
STRING (EMBL)TTTY6
ZODIACTTTY6
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTTTY6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:27:30 CEST 2021

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