Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TTTY6 (testis-specific transcript, Y-linked 6 (non-protein coding))

Identity

Alias_namestestis-specific transcript, Y-linked 6
Alias_symbol (synonym)TTY6
TTTY6A
LINC00127
Other aliasNCRNA00127
HGNC (Hugo) TTTY6
LocusID (NCBI) 84672
Atlas_Id 75348
Location Yq11.223  [Link to chromosome band Yq11]
Location_base_pair Starts at 24291112 and ends at 24292978 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTTY6   16483
Cards
Entrez_Gene (NCBI)TTTY6  84672  testis-specific transcript, Y-linked 6 (non-protein coding)
AliasesLINC00127; NCRNA00127; TTTY6A; TTY6
GeneCards (Weizmann)TTTY6
Ensembl hg19 (Hinxton)ENSG00000131538 [Gene_View]  chrY:24291112-24292978 [Contig_View]  TTTY6 [Vega]
Ensembl hg38 (Hinxton)ENSG00000131538 [Gene_View]  chrY:24291112-24292978 [Contig_View]  TTTY6 [Vega]
ICGC DataPortalENSG00000131538
TCGA cBioPortalTTTY6
AceView (NCBI)TTTY6
Genatlas (Paris)TTTY6
WikiGenes84672
SOURCE (Princeton)TTTY6
Genetics Home Reference (NIH)TTTY6
Genomic and cartography
GoldenPath hg19 (UCSC)TTTY6  -     chrY:24291112-24292978 +  Yq11.223   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TTTY6  -     Yq11.223   [Description]    (hg38-Dec_2013)
EnsemblTTTY6 - Yq11.223 [CytoView hg19]  TTTY6 - Yq11.223 [CytoView hg38]
Mapping of homologs : NCBITTTY6 [Mapview hg19]  TTTY6 [Mapview hg38]
OMIM400039   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000024 NG_004755 NT_011903
Consensus coding sequences : CCDS (NCBI)TTTY6
Cluster EST : UnigeneHs.535085 [ NCBI ]
CGAP (NCI)Hs.535085
Alternative Splicing GalleryENSG00000131538
Gene ExpressionTTTY6 [ NCBI-GEO ]   TTTY6 [ EBI - ARRAY_EXPRESS ]   TTTY6 [ SEEK ]   TTTY6 [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)84672
GTEX Portal (Tissue expression)TTTY6
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY6
DMDM Disease mutations84672
Blocks (Seattle)TTTY6
Human Protein AtlasENSG00000131538
Protein Interaction databases
FunCoupENSG00000131538
BioGRIDTTTY6
STRING (EMBL)TTTY6
ZODIACTTTY6
Ontologies - Pathways
Huge Navigator TTTY6 [HugePedia]
snp3D : Map Gene to Disease84672
BioCentury BCIQTTTY6
ClinGenTTTY6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84672
Chemical/Pharm GKB GenePA38151
Clinical trialTTTY6
Miscellaneous
canSAR (ICR)TTTY6 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTTY6
EVEXTTTY6
GoPubMedTTTY6
iHOPTTTY6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:50:22 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.