Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TTTY7 (testis-specific transcript, Y-linked 7 (non-protein coding))

Identity

Alias_namestestis-specific transcript, Y-linked 7
Alias_symbol (synonym)LINC00129
TTTY7A
Other aliasCLONE795723
NCRNA00129
TTTY7B
TTY7
HGNC (Hugo) TTTY7
LocusID (NCBI) 246122
Atlas_Id 75350
Location Yp11.2  [Link to chromosome band Yp11]
Location_base_pair Starts at 6449468 and ends at 6457906 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTTY7   18488
Cards
Entrez_Gene (NCBI)TTTY7  246122  testis-specific transcript, Y-linked 7 (non-protein coding)
AliasesCLONE795723; LINC00129; NCRNA00129; TTTY7A; 
TTTY7B; TTY7
GeneCards (Weizmann)TTTY7
Ensembl hg19 (Hinxton)ENSG00000147753 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000147753 [Gene_View]  chrY:6449468-6457906 [Contig_View]  TTTY7 [Vega]
ICGC DataPortalENSG00000147753
TCGA cBioPortalTTTY7
AceView (NCBI)TTTY7
Genatlas (Paris)TTTY7
WikiGenes246122
SOURCE (Princeton)TTTY7
Genetics Home Reference (NIH)TTTY7
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY7  -     chrY:6449468-6457906 +  Yp11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY7  -     Yp11.2   [Description]    (hg19-Feb_2009)
EnsemblTTTY7 - Yp11.2 [CytoView hg19]  TTTY7 - Yp11.2 [CytoView hg38]
Mapping of homologs : NCBITTTY7 [Mapview hg19]  TTTY7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF278761 AF278762 AF332232 AW514248
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY7
Cluster EST : UnigeneHs.407277 [ NCBI ]
CGAP (NCI)Hs.407277
Alternative Splicing GalleryENSG00000147753
Gene ExpressionTTTY7 [ NCBI-GEO ]   TTTY7 [ EBI - ARRAY_EXPRESS ]   TTTY7 [ SEEK ]   TTTY7 [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)246122
GTEX Portal (Tissue expression)TTTY7
Human Protein AtlasENSG00000147753-TTTY7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY7
DMDM Disease mutations246122
Blocks (Seattle)TTTY7
Human Protein Atlas [tissue]ENSG00000147753-TTTY7 [tissue]
IPIIPI00374693   
Protein Interaction databases
FunCoupENSG00000147753
BioGRIDTTTY7
STRING (EMBL)TTTY7
ZODIACTTTY7
Ontologies - Pathways
Huge Navigator TTTY7 [HugePedia]
snp3D : Map Gene to Disease246122
BioCentury BCIQTTTY7
ClinGenTTTY7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD246122
Chemical/Pharm GKB GenePA38551
Clinical trialTTTY7
Miscellaneous
canSAR (ICR)TTTY7 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTTY7
EVEXTTTY7
GoPubMedTTTY7
iHOPTTTY7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:01:18 CET 2017

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