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TUBAL3 (tubulin alpha like 3)

Identity

Alias (NCBI)-
HGNC (Hugo) TUBAL3
HGNC Alias symbFLJ21665
HGNC Previous nametubulin, alpha-like 3
LocusID (NCBI) 79861
Atlas_Id 75364
Location 10p15.1  [Link to chromosome band 10p15]
Location_base_pair Starts at 5393101 and ends at 5404828 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
WDR37 (10p15.3) / TUBAL3 (10p15.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TUBAL3   23534
Cards
Entrez_Gene (NCBI)TUBAL3    tubulin alpha like 3
Aliases
GeneCards (Weizmann)TUBAL3
Ensembl hg19 (Hinxton)ENSG00000178462 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178462 [Gene_View]  ENSG00000178462 [Sequence]  chr10:5393101-5404828 [Contig_View]  TUBAL3 [Vega]
ICGC DataPortalENSG00000178462
TCGA cBioPortalTUBAL3
AceView (NCBI)TUBAL3
Genatlas (Paris)TUBAL3
SOURCE (Princeton)TUBAL3
Genetics Home Reference (NIH)TUBAL3
Genomic and cartography
GoldenPath hg38 (UCSC)TUBAL3  -     chr10:5393101-5404828 -  10p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TUBAL3  -     10p15.1   [Description]    (hg19-Feb_2009)
GoldenPathTUBAL3 - 10p15.1 [CytoView hg19]  TUBAL3 - 10p15.1 [CytoView hg38]
ImmunoBaseENSG00000178462
Genome Data Viewer NCBITUBAL3 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK025318 AK296616 BC098247 BC099716 BC105634
RefSeq transcript (Entrez)NM_001171864 NM_024803
Consensus coding sequences : CCDS (NCBI)TUBAL3
Gene ExpressionTUBAL3 [ NCBI-GEO ]   TUBAL3 [ EBI - ARRAY_EXPRESS ]   TUBAL3 [ SEEK ]   TUBAL3 [ MEM ]
Gene Expression Viewer (FireBrowse)TUBAL3 [ Firebrowse - Broad ]
GenevisibleExpression of TUBAL3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79861
GTEX Portal (Tissue expression)TUBAL3
Human Protein AtlasENSG00000178462-TUBAL3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NHL2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NHL2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NHL2
PhosPhoSitePlusA6NHL2
Domaine pattern : Prosite (Expaxy)TUBULIN (PS00227)   
Domains : Interpro (EBI)Alpha_tubulin    Tub_FtsZ_C    Tubulin    Tubulin/FtsZ_2-layer-sand-dom    Tubulin/FtsZ_C_sf    Tubulin/FtsZ_GTPase_sf    Tubulin_C    Tubulin_CS    Tubulin_FtsZ_GTPase   
Domain families : Pfam (Sanger)Tubulin (PF00091)    Tubulin_C (PF03953)   
Domain families : Pfam (NCBI)pfam00091    pfam03953   
Domain families : Smart (EMBL)Tubulin (SM00864)  Tubulin_C (SM00865)  
Conserved Domain (NCBI)TUBAL3
SuperfamilyA6NHL2
AlphaFold pdb e-kbA6NHL2   
Human Protein Atlas [tissue]ENSG00000178462-TUBAL3 [tissue]
HPRD08640
Protein Interaction databases
DIP (DOE-UCLA)A6NHL2
IntAct (EBI)A6NHL2
BioGRIDTUBAL3
STRING (EMBL)TUBAL3
ZODIACTUBAL3
Ontologies - Pathways
QuickGOA6NHL2
Ontology : AmiGOmicrotubule cytoskeleton organization  mitotic cell cycle  structural constituent of cytoskeleton  GTP binding  cytoplasm  microtubule  
Ontology : EGO-EBImicrotubule cytoskeleton organization  mitotic cell cycle  structural constituent of cytoskeleton  GTP binding  cytoplasm  microtubule  
NDEx NetworkTUBAL3
Atlas of Cancer Signalling NetworkTUBAL3
Wikipedia pathwaysTUBAL3
Orthology - Evolution
OrthoDB79861
GeneTree (enSembl)ENSG00000178462
Phylogenetic Trees/Animal Genes : TreeFamTUBAL3
Homologs : HomoloGeneTUBAL3
Homology/Alignments : Family Browser (UCSC)TUBAL3
Gene fusions - Rearrangements
Fusion : QuiverTUBAL3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTUBAL3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TUBAL3
dbVarTUBAL3
ClinVarTUBAL3
MonarchTUBAL3
1000_GenomesTUBAL3 
Exome Variant ServerTUBAL3
GNOMAD BrowserENSG00000178462
Varsome BrowserTUBAL3
ACMGTUBAL3 variants
VarityA6NHL2
Genomic Variants (DGV)TUBAL3 [DGVbeta]
DECIPHERTUBAL3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTUBAL3 
Mutations
ICGC Data PortalTUBAL3 
TCGA Data PortalTUBAL3 
Broad Tumor PortalTUBAL3
OASIS PortalTUBAL3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTUBAL3  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTUBAL3
Mutations and Diseases : HGMDTUBAL3
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTUBAL3
DgiDB (Drug Gene Interaction Database)TUBAL3
DoCM (Curated mutations)TUBAL3
CIViC (Clinical Interpretations of Variants in Cancer)TUBAL3
Cancer3DTUBAL3
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTUBAL3
MedgenTUBAL3
Genetic Testing Registry TUBAL3
NextProtA6NHL2 [Medical]
GENETestsTUBAL3
Target ValidationTUBAL3
Huge Navigator TUBAL3 [HugePedia]
ClinGenTUBAL3
Clinical trials, drugs, therapy
MyCancerGenomeTUBAL3
Protein Interactions : CTDTUBAL3
Pharm GKB GenePA134953102
PharosA6NHL2
Clinical trialTUBAL3
Miscellaneous
canSAR (ICR)TUBAL3
HarmonizomeTUBAL3
DataMed IndexTUBAL3
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTUBAL3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:27:32 CEST 2021

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