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TULP2 (TUB like protein 2)

Identity

Alias (NCBI)CT65
TUBL2
HGNC (Hugo) TULP2
HGNC Alias symbTUBL2
CT65
HGNC Alias namecancer/testis antigen 65
LocusID (NCBI) 7288
Atlas_Id 75378
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 48880967 and ends at 48898744 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TULP2   12424
Cards
Entrez_Gene (NCBI)TULP2    TUB like protein 2
AliasesCT65; TUBL2
GeneCards (Weizmann)TULP2
Ensembl hg19 (Hinxton)ENSG00000104804 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000104804 [Gene_View]  ENSG00000104804 [Sequence]  chr19:48880967-48898744 [Contig_View]  TULP2 [Vega]
ICGC DataPortalENSG00000104804
TCGA cBioPortalTULP2
AceView (NCBI)TULP2
Genatlas (Paris)TULP2
SOURCE (Princeton)TULP2
Genetics Home Reference (NIH)TULP2
Genomic and cartography
GoldenPath hg38 (UCSC)TULP2  -     chr19:48880967-48898744 -  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TULP2  -     19q13.33   [Description]    (hg19-Feb_2009)
GoldenPathTULP2 - 19q13.33 [CytoView hg19]  TULP2 - 19q13.33 [CytoView hg38]
ImmunoBaseENSG00000104804
Genome Data Viewer NCBITULP2 [Mapview hg19]  
OMIM602309   
Gene and transcription
Genbank (Entrez)BC026070 DB442827 U82469
RefSeq transcript (Entrez)NM_003323
Consensus coding sequences : CCDS (NCBI)TULP2
Gene ExpressionTULP2 [ NCBI-GEO ]   TULP2 [ EBI - ARRAY_EXPRESS ]   TULP2 [ SEEK ]   TULP2 [ MEM ]
Gene Expression Viewer (FireBrowse)TULP2 [ Firebrowse - Broad ]
GenevisibleExpression of TULP2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7288
GTEX Portal (Tissue expression)TULP2
Human Protein AtlasENSG00000104804-TULP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO00295   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO00295  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO00295
PhosPhoSitePlusO00295
Domaine pattern : Prosite (Expaxy)TUB_1 (PS01200)   
Domains : Interpro (EBI)Tubby-like_C    Tubby_C    Tubby_C_CS    Tubby_N   
Domain families : Pfam (Sanger)Tub (PF01167)    Tub_N (PF16322)   
Domain families : Pfam (NCBI)pfam01167    pfam16322   
Conserved Domain (NCBI)TULP2
SuperfamilyO00295
AlphaFold pdb e-kbO00295   
Human Protein Atlas [tissue]ENSG00000104804-TULP2 [tissue]
HPRD03813
Protein Interaction databases
DIP (DOE-UCLA)O00295
IntAct (EBI)O00295
BioGRIDTULP2
STRING (EMBL)TULP2
ZODIACTULP2
Ontologies - Pathways
QuickGOO00295
Ontology : AmiGOextracellular region  cytoplasm  cilium  visual perception  protein-containing complex binding  protein localization to cilium  
Ontology : EGO-EBIextracellular region  cytoplasm  cilium  visual perception  protein-containing complex binding  protein localization to cilium  
NDEx NetworkTULP2
Atlas of Cancer Signalling NetworkTULP2
Wikipedia pathwaysTULP2
Orthology - Evolution
OrthoDB7288
GeneTree (enSembl)ENSG00000104804
Phylogenetic Trees/Animal Genes : TreeFamTULP2
Homologs : HomoloGeneTULP2
Homology/Alignments : Family Browser (UCSC)TULP2
Gene fusions - Rearrangements
Fusion : QuiverTULP2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTULP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TULP2
dbVarTULP2
ClinVarTULP2
MonarchTULP2
1000_GenomesTULP2 
Exome Variant ServerTULP2
GNOMAD BrowserENSG00000104804
Varsome BrowserTULP2
ACMGTULP2 variants
VarityO00295
Genomic Variants (DGV)TULP2 [DGVbeta]
DECIPHERTULP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTULP2 
Mutations
ICGC Data PortalTULP2 
TCGA Data PortalTULP2 
Broad Tumor PortalTULP2
OASIS PortalTULP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTULP2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTULP2
Mutations and Diseases : HGMDTULP2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTULP2
DgiDB (Drug Gene Interaction Database)TULP2
DoCM (Curated mutations)TULP2
CIViC (Clinical Interpretations of Variants in Cancer)TULP2
Cancer3DTULP2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602309   
Orphanet
DisGeNETTULP2
MedgenTULP2
Genetic Testing Registry TULP2
NextProtO00295 [Medical]
GENETestsTULP2
Target ValidationTULP2
Huge Navigator TULP2 [HugePedia]
ClinGenTULP2
Clinical trials, drugs, therapy
MyCancerGenomeTULP2
Protein Interactions : CTDTULP2
Pharm GKB GenePA37086
PharosO00295
Clinical trialTULP2
Miscellaneous
canSAR (ICR)TULP2
HarmonizomeTULP2
DataMed IndexTULP2
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTULP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:27:35 CEST 2021

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