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TUNAR (TCL1 upstream neural differentiation-associated RNA)

Identity

Alias (NCBI)HI-LNC78
LINC00617
TUNA
HGNC (Hugo) TUNAR
HGNC Alias symbTUNA
HI-LNC78
HGNC Alias nameTcl1 upstream neuron-associated lincRNA
 Human Islet Long Non Coding RNA 78
HGNC Previous nameLINC00617
HGNC Previous namelong intergenic non-protein coding RNA 617
 TCL1A upstream neural differentiation-associated RNA
LocusID (NCBI) 100507043
Atlas_Id 57163
Location 14q32.2  [Link to chromosome band 14q32]
Location_base_pair Starts at 95876392 and ends at 95925571 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TUNAR   44088
Cards
Entrez_Gene (NCBI)TUNAR    TCL1 upstream neural differentiation-associated RNA
AliasesHI-LNC78; LINC00617; TUNA
GeneCards (Weizmann)TUNAR
Ensembl hg19 (Hinxton)ENSG00000250366 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250366 [Gene_View]  ENSG00000250366 [Sequence]  chr14:95876392-95925571 [Contig_View]  TUNAR [Vega]
ICGC DataPortalENSG00000250366
TCGA cBioPortalTUNAR
AceView (NCBI)TUNAR
Genatlas (Paris)TUNAR
SOURCE (Princeton)TUNAR
Genetics Home Reference (NIH)TUNAR
Genomic and cartography
GoldenPath hg38 (UCSC)TUNAR  -     chr14:95876392-95925571 +  14q32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TUNAR  -     14q32.2   [Description]    (hg19-Feb_2009)
GoldenPathTUNAR - 14q32.2 [CytoView hg19]  TUNAR - 14q32.2 [CytoView hg38]
ImmunoBaseENSG00000250366
Genome Data Viewer NCBITUNAR [Mapview hg19]  
OMIM615719   
Gene and transcription
Genbank (Entrez)AK023027 AK091547 BC016484 DA408223 DA412350
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TUNAR
Gene ExpressionTUNAR [ NCBI-GEO ]   TUNAR [ EBI - ARRAY_EXPRESS ]   TUNAR [ SEEK ]   TUNAR [ MEM ]
Gene Expression Viewer (FireBrowse)TUNAR [ Firebrowse - Broad ]
GenevisibleExpression of TUNAR in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100507043
GTEX Portal (Tissue expression)TUNAR
Human Protein AtlasENSG00000250366-TUNAR [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TUNAR
Human Protein Atlas [tissue]ENSG00000250366-TUNAR [tissue]
Protein Interaction databases
BioGRIDTUNAR
STRING (EMBL)TUNAR
ZODIACTUNAR
Ontologies - Pathways
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTUNAR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:36:52 CEST 2021

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