Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TUNAR (TCL1 upstream neural differentiation-associated RNA)

Identity

Alias_namesLINC00617
long intergenic non-protein coding RNA 617
TCL1A upstream neural differentiation-associated RNA
Alias_symbol (synonym)TUNA
HI-LNC78
Other alias
HGNC (Hugo) TUNAR
LocusID (NCBI) 100507043
Atlas_Id 75380
Location 14q32.2  [Link to chromosome band 14q32]
Location_base_pair Starts at 96343109 and ends at 96391908 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TUNAR   44088
Cards
Entrez_Gene (NCBI)TUNAR  100507043  TCL1 upstream neural differentiation-associated RNA
AliasesHI-LNC78; LINC00617; TUNA
GeneCards (Weizmann)TUNAR
Ensembl hg19 (Hinxton)ENSG00000250366 [Gene_View]  chr14:96343109-96391908 [Contig_View]  TUNAR [Vega]
Ensembl hg38 (Hinxton)ENSG00000250366 [Gene_View]  chr14:96343109-96391908 [Contig_View]  TUNAR [Vega]
ICGC DataPortalENSG00000250366
TCGA cBioPortalTUNAR
AceView (NCBI)TUNAR
Genatlas (Paris)TUNAR
WikiGenes100507043
SOURCE (Princeton)TUNAR
Genetics Home Reference (NIH)TUNAR
Genomic and cartography
GoldenPath hg19 (UCSC)TUNAR  -     chr14:96343109-96391908 +  14q32.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TUNAR  -     14q32.2   [Description]    (hg38-Dec_2013)
EnsemblTUNAR - 14q32.2 [CytoView hg19]  TUNAR - 14q32.2 [CytoView hg38]
Mapping of homologs : NCBITUNAR [Mapview hg19]  TUNAR [Mapview hg38]
OMIM615719   
Gene and transcription
Genbank (Entrez)AK023027 AK091547 BC016484 DA412350 HG506528
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)TUNAR
Cluster EST : UnigeneHs.455955 [ NCBI ]
CGAP (NCI)Hs.455955
Alternative Splicing GalleryENSG00000250366
Gene ExpressionTUNAR [ NCBI-GEO ]   TUNAR [ EBI - ARRAY_EXPRESS ]   TUNAR [ SEEK ]   TUNAR [ MEM ]
Gene Expression Viewer (FireBrowse)TUNAR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507043
GTEX Portal (Tissue expression)TUNAR
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TUNAR
DMDM Disease mutations100507043
Blocks (Seattle)TUNAR
Human Protein AtlasENSG00000250366
Protein Interaction databases
FunCoupENSG00000250366
BioGRIDTUNAR
STRING (EMBL)TUNAR
ZODIACTUNAR
Ontologies - Pathways
Huge Navigator TUNAR [HugePedia]
snp3D : Map Gene to Disease100507043
BioCentury BCIQTUNAR
ClinGenTUNAR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507043
Clinical trialTUNAR
Miscellaneous
canSAR (ICR)TUNAR (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTUNAR
EVEXTUNAR
GoPubMedTUNAR
iHOPTUNAR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:50:29 CET 2017

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