Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TUSC7 (tumor suppressor candidate 7 (non-protein coding))

Identity

Alias_namesNCRNA00295
LSAMP-AS3
non-protein coding RNA 295
LSAMP antisense RNA 3
Alias_symbol (synonym)LINC00902
LOC285194
Other aliasLSAMP-AS1
LSAMPAS3
HGNC (Hugo) TUSC7
LocusID (NCBI) 285194
Atlas_Id 53336
Location 3q13.31  [Link to chromosome band 3q13]
Location_base_pair Starts at 116709788 and ends at 116717040 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TUSC7   27701
Cards
Entrez_Gene (NCBI)TUSC7  285194  tumor suppressor candidate 7 (non-protein coding)
AliasesLINC00902; LSAMP-AS1; LSAMP-AS3; LSAMPAS3; 
NCRNA00295
GeneCards (Weizmann)TUSC7
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:116709788-116717040 [Contig_View]  TUSC7 [Vega]
TCGA cBioPortalTUSC7
AceView (NCBI)TUSC7
Genatlas (Paris)TUSC7
WikiGenes285194
SOURCE (Princeton)TUSC7
Genetics Home Reference (NIH)TUSC7
Genomic and cartography
GoldenPath hg38 (UCSC)TUSC7  -     chr3:116709788-116717040 +  3q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TUSC7  -     3q13.31   [Description]    (hg19-Feb_2009)
EnsemblTUSC7 - 3q13.31 [CytoView hg19]  TUSC7 - 3q13.31 [CytoView hg38]
Mapping of homologs : NCBITUSC7 [Mapview hg19]  TUSC7 [Mapview hg38]
OMIM616057   
Gene and transcription
Genbank (Entrez)AW082858 AW195910 BC035185 BC104179 BC104180
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TUSC7
Cluster EST : UnigeneHs.120364 [ NCBI ]
CGAP (NCI)Hs.120364
Gene ExpressionTUSC7 [ NCBI-GEO ]   TUSC7 [ EBI - ARRAY_EXPRESS ]   TUSC7 [ SEEK ]   TUSC7 [ MEM ]
Gene Expression Viewer (FireBrowse)TUSC7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)285194
GTEX Portal (Tissue expression)TUSC7
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TUSC7
DMDM Disease mutations285194
Blocks (Seattle)TUSC7
IPIIPI00793374   
Protein Interaction databases
BioGRIDTUSC7
STRING (EMBL)TUSC7
ZODIACTUSC7
Ontologies - Pathways
Huge Navigator TUSC7 [HugePedia]
snp3D : Map Gene to Disease285194
BioCentury BCIQTUSC7
ClinGenTUSC7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285194
Clinical trialTUSC7
Miscellaneous
canSAR (ICR)TUSC7 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTUSC7
EVEXTUSC7
GoPubMedTUSC7
iHOPTUSC7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:40:16 CET 2017

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