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TVP23C-CDRT4 (TVP23C-CDRT4 readthrough)

Identity

Alias_namesFAM18B2-CDRT4
FAM18B2-CDRT4 readthrough
Other alias
HGNC (Hugo) TVP23C-CDRT4
LocusID (NCBI) 100533496
Atlas_Id 75385
Location 17p12  [Link to chromosome band 17p12]
Location_base_pair Starts at 15436015 and ends at 15563631 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TVP23C-CDRT4   42961
Cards
Entrez_Gene (NCBI)TVP23C-CDRT4  100533496  TVP23C-CDRT4 readthrough
AliasesFAM18B2-CDRT4
GeneCards (Weizmann)TVP23C-CDRT4
Ensembl hg19 (Hinxton)ENSG00000259024 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259024 [Gene_View]  chr17:15436015-15563631 [Contig_View]  TVP23C-CDRT4 [Vega]
ICGC DataPortalENSG00000259024
TCGA cBioPortalTVP23C-CDRT4
AceView (NCBI)TVP23C-CDRT4
Genatlas (Paris)TVP23C-CDRT4
WikiGenes100533496
SOURCE (Princeton)TVP23C-CDRT4
Genetics Home Reference (NIH)TVP23C-CDRT4
Genomic and cartography
GoldenPath hg38 (UCSC)TVP23C-CDRT4  -     chr17:15436015-15563631 -  17p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TVP23C-CDRT4  -     17p12   [Description]    (hg19-Feb_2009)
EnsemblTVP23C-CDRT4 - 17p12 [CytoView hg19]  TVP23C-CDRT4 - 17p12 [CytoView hg38]
Mapping of homologs : NCBITVP23C-CDRT4 [Mapview hg19]  TVP23C-CDRT4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB074181 AK303475 CB850543 DA796743
RefSeq transcript (Entrez)NM_001204478
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TVP23C-CDRT4
Cluster EST : UnigeneHs.164595 [ NCBI ]
CGAP (NCI)Hs.164595
Alternative Splicing GalleryENSG00000259024
Gene ExpressionTVP23C-CDRT4 [ NCBI-GEO ]   TVP23C-CDRT4 [ EBI - ARRAY_EXPRESS ]   TVP23C-CDRT4 [ SEEK ]   TVP23C-CDRT4 [ MEM ]
Gene Expression Viewer (FireBrowse)TVP23C-CDRT4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100533496
GTEX Portal (Tissue expression)TVP23C-CDRT4
Human Protein AtlasENSG00000259024-TVP23C-CDRT4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TVP23C-CDRT4
DMDM Disease mutations100533496
Blocks (Seattle)TVP23C-CDRT4
Human Protein Atlas [tissue]ENSG00000259024-TVP23C-CDRT4 [tissue]
IPIIPI00940144   IPI00910394   IPI00977225   
Protein Interaction databases
FunCoupENSG00000259024
BioGRIDTVP23C-CDRT4
STRING (EMBL)TVP23C-CDRT4
ZODIACTVP23C-CDRT4
Ontologies - Pathways
Huge Navigator TVP23C-CDRT4 [HugePedia]
snp3D : Map Gene to Disease100533496
BioCentury BCIQTVP23C-CDRT4
ClinGenTVP23C-CDRT4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100533496
Clinical trialTVP23C-CDRT4
Miscellaneous
canSAR (ICR)TVP23C-CDRT4 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTVP23C-CDRT4
EVEXTVP23C-CDRT4
GoPubMedTVP23C-CDRT4
iHOPTVP23C-CDRT4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:37:13 CET 2017

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