Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TXLNGY (taxilin gamma pseudogene, Y-linked)

Identity

Alias (NCBI)CYorf15A
CYorf15B
TXLNG2P
HGNC (Hugo) TXLNGY
HGNC Previous nameCYorf15A
 CYorf15B
 TXLNG2P
HGNC Previous namechromosome Y open reading frame 15A
 chromosome Y open reading frame 15B
 taxilin gamma 2, pseudogene
LocusID (NCBI) 246126
Atlas_Id 75388
Location Yq11.222-q11.223  [Link to chromosome band Yq11]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CCNI (4q21.1) / TXLNGY (Yq11.222)NLGN4Y (Yq11.221) / TXLNGY (Yq11.222)TXLNGY (Yq11.222) / TXLNGY (Yq11.222)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TXLNGY   18473
Cards
Entrez_Gene (NCBI)TXLNGY    taxilin gamma pseudogene, Y-linked
AliasesCYorf15A; CYorf15B; TXLNG2P
GeneCards (Weizmann)TXLNGY
Ensembl hg19 (Hinxton)ENSG00000131002 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000131002 [Gene_View]  ENSG00000131002 [Sequence]  - [Contig_View]  TXLNGY [Vega]
ICGC DataPortalENSG00000131002
TCGA cBioPortalTXLNGY
AceView (NCBI)TXLNGY
Genatlas (Paris)TXLNGY
SOURCE (Princeton)TXLNGY
Genetics Home Reference (NIH)TXLNGY
Genomic and cartography
GoldenPath hg38 (UCSC)TXLNGY  -  
GoldenPath hg19 (UCSC)TXLNGY  -  
GoldenPathTXLNGY - [CytoView hg19]  TXLNGY - [CytoView hg38]
ImmunoBaseENSG00000131002
Genome Data Viewer NCBITXLNGY [Mapview hg19]  
OMIM400031   400032   
Gene and transcription
Genbank (Entrez)AF332224 AF332225 AI129169 AI828041 AK090535
RefSeq transcript (Entrez)NM_001005852
Consensus coding sequences : CCDS (NCBI)TXLNGY
Gene ExpressionTXLNGY [ NCBI-GEO ]   TXLNGY [ EBI - ARRAY_EXPRESS ]   TXLNGY [ SEEK ]   TXLNGY [ MEM ]
Gene Expression Viewer (FireBrowse)TXLNGY [ Firebrowse - Broad ]
GenevisibleExpression of TXLNGY in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)246126
GTEX Portal (Tissue expression)TXLNGY
Human Protein AtlasENSG00000131002-TXLNGY [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BZA5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BZA5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BZA5
PhosPhoSitePlusQ9BZA5
Domains : Interpro (EBI)Taxilin_fam   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TXLNGY
SuperfamilyQ9BZA5
AlphaFold pdb e-kbQ9BZA5   
Human Protein Atlas [tissue]ENSG00000131002-TXLNGY [tissue]
HPRD10618
Protein Interaction databases
DIP (DOE-UCLA)Q9BZA5
IntAct (EBI)Q9BZA5
BioGRIDTXLNGY
STRING (EMBL)TXLNGY
ZODIACTXLNGY
Ontologies - Pathways
QuickGOQ9BZA5
Ontology : AmiGOsyntaxin binding  
Ontology : EGO-EBIsyntaxin binding  
NDEx NetworkTXLNGY
Atlas of Cancer Signalling NetworkTXLNGY
Wikipedia pathwaysTXLNGY
Orthology - Evolution
OrthoDB246126
GeneTree (enSembl)ENSG00000131002
Phylogenetic Trees/Animal Genes : TreeFamTXLNGY
Homologs : HomoloGeneTXLNGY
Homology/Alignments : Family Browser (UCSC)TXLNGY
Gene fusions - Rearrangements
Fusion : QuiverTXLNGY
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTXLNGY [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TXLNGY
dbVarTXLNGY
ClinVarTXLNGY
MonarchTXLNGY
1000_GenomesTXLNGY 
Exome Variant ServerTXLNGY
GNOMAD BrowserENSG00000131002
Varsome BrowserTXLNGY
ACMGTXLNGY variants
VarityQ9BZA5
Genomic Variants (DGV)TXLNGY [DGVbeta]
DECIPHERTXLNGY [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTXLNGY 
Mutations
ICGC Data PortalTXLNGY 
TCGA Data PortalTXLNGY 
Broad Tumor PortalTXLNGY
OASIS PortalTXLNGY [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTXLNGY
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTXLNGY
DgiDB (Drug Gene Interaction Database)TXLNGY
DoCM (Curated mutations)TXLNGY
CIViC (Clinical Interpretations of Variants in Cancer)TXLNGY
Cancer3DTXLNGY
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM400031    400032   
Orphanet
DisGeNETTXLNGY
MedgenTXLNGY
Genetic Testing Registry TXLNGY
NextProtQ9BZA5 [Medical]
GENETestsTXLNGY
Target ValidationTXLNGY
Huge Navigator TXLNGY [HugePedia]
ClinGenTXLNGY
Clinical trials, drugs, therapy
MyCancerGenomeTXLNGY
Protein Interactions : CTDTXLNGY
Pharm GKB GenePA38545
PharosQ9BZA5
Clinical trialTXLNGY
Miscellaneous
canSAR (ICR)TXLNGY
HarmonizomeTXLNGY
DataMed IndexTXLNGY
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTXLNGY
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:27:37 CEST 2021

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