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TXNRD1 (thioredoxin reductase 1)

Identity

Alias (NCBI)GRIM-12
TR
TR1
TRXR1
TXNR
HGNC (Hugo) TXNRD1
HGNC Alias symbTXNR
GRIM-12
Trxr1
HGNC Alias nameselenoprotein TXNRD1
LocusID (NCBI) 7296
Atlas_Id 46587
Location 12q23.3  [Link to chromosome band 12q23]
Location_base_pair Starts at 104287032 and ends at 104350307 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CHST11 (12q23.3) / TXNRD1 (12q23.3)MAP7D1 (1p34.3) / TXNRD1 (12q23.3)SRSF11 (1p31.1) / TXNRD1 (12q23.3)
TXNRD1 (12q23.3) / ADGRD1 (12q24.33)TXNRD1 (12q23.3) / CHST11 (12q23.3)TXNRD1 (12q23.3) / HCFC2 (12q23.3)
TXNRD1 (12q23.3) / LCN2 (9q34.11)TXNRD1 (12q23.3) / NPM1 (5q35.1)TXNRD1 (12q23.3) / RNF185 (22q12.2)
TXNRD1 (12q23.3) / UIMC1 (5q35.2)TXNRD1 (12q23.3) / USP30 (12q24.11)TXNRD1 12q23.3 / HCFC2 12q23.3
TXNRD1 12q23.3 / USP30 12q24.11

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TXNRD1   12437
Cards
Entrez_Gene (NCBI)TXNRD1    thioredoxin reductase 1
AliasesGRIM-12; TR; TR1; TRXR1; 
TXNR
GeneCards (Weizmann)TXNRD1
Ensembl hg19 (Hinxton)ENSG00000198431 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198431 [Gene_View]  ENSG00000198431 [Sequence]  chr12:104287032-104350307 [Contig_View]  TXNRD1 [Vega]
ICGC DataPortalENSG00000198431
TCGA cBioPortalTXNRD1
AceView (NCBI)TXNRD1
Genatlas (Paris)TXNRD1
SOURCE (Princeton)TXNRD1
Genetics Home Reference (NIH)TXNRD1
Genomic and cartography
GoldenPath hg38 (UCSC)TXNRD1  -     chr12:104287032-104350307 +  12q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TXNRD1  -     12q23.3   [Description]    (hg19-Feb_2009)
GoldenPathTXNRD1 - 12q23.3 [CytoView hg19]  TXNRD1 - 12q23.3 [CytoView hg38]
ImmunoBaseENSG00000198431
Genome Data Viewer NCBITXNRD1 [Mapview hg19]  
OMIM601112   
Gene and transcription
Genbank (Entrez)AF077367 AF208018 AI097548 AJ001050 AK128515
RefSeq transcript (Entrez)NM_001093771 NM_001261445 NM_001261446 NM_003330 NM_182729 NM_182742 NM_182743
Consensus coding sequences : CCDS (NCBI)TXNRD1
Gene ExpressionTXNRD1 [ NCBI-GEO ]   TXNRD1 [ EBI - ARRAY_EXPRESS ]   TXNRD1 [ SEEK ]   TXNRD1 [ MEM ]
Gene Expression Viewer (FireBrowse)TXNRD1 [ Firebrowse - Broad ]
GenevisibleExpression of TXNRD1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7296
GTEX Portal (Tissue expression)TXNRD1
Human Protein AtlasENSG00000198431-TXNRD1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TXNRD1
Human Protein Atlas [tissue]ENSG00000198431-TXNRD1 [tissue]
HPRD03068
Protein Interaction databases
BioGRIDTXNRD1
STRING (EMBL)TXNRD1
ZODIACTXNRD1
Ontologies - Pathways
Litterature
PubMed166 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTXNRD1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:36:58 CEST 2021

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