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UAP1L1 (UDP-N-acetylglucosamine pyrophosphorylase 1 like 1)

Identity

Other alias-
HGNC (Hugo) UAP1L1
LocusID (NCBI) 91373
Atlas_Id 75402
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 137077501 and ends at 137084538 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
UAP1L1 (9q34.3) / PLG (6q26)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UAP1L1   28082
Cards
Entrez_Gene (NCBI)UAP1L1  91373  UDP-N-acetylglucosamine pyrophosphorylase 1 like 1
Aliases
GeneCards (Weizmann)UAP1L1
Ensembl hg19 (Hinxton)ENSG00000197355 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197355 [Gene_View]  chr9:137077501-137084538 [Contig_View]  UAP1L1 [Vega]
ICGC DataPortalENSG00000197355
TCGA cBioPortalUAP1L1
AceView (NCBI)UAP1L1
Genatlas (Paris)UAP1L1
WikiGenes91373
SOURCE (Princeton)UAP1L1
Genetics Home Reference (NIH)UAP1L1
Genomic and cartography
GoldenPath hg38 (UCSC)UAP1L1  -     chr9:137077501-137084538 +  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UAP1L1  -     9q34.3   [Description]    (hg19-Feb_2009)
EnsemblUAP1L1 - 9q34.3 [CytoView hg19]  UAP1L1 - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBIUAP1L1 [Mapview hg19]  UAP1L1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK022632 AK074143 AK095393 AK128529 AL832421
RefSeq transcript (Entrez)NM_207309
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UAP1L1
Cluster EST : UnigeneHs.142076 [ NCBI ]
CGAP (NCI)Hs.142076
Alternative Splicing GalleryENSG00000197355
Gene ExpressionUAP1L1 [ NCBI-GEO ]   UAP1L1 [ EBI - ARRAY_EXPRESS ]   UAP1L1 [ SEEK ]   UAP1L1 [ MEM ]
Gene Expression Viewer (FireBrowse)UAP1L1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)91373
GTEX Portal (Tissue expression)UAP1L1
Human Protein AtlasENSG00000197355-UAP1L1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3KQV9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3KQV9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3KQV9
Splice isoforms : SwissVarQ3KQV9
PhosPhoSitePlusQ3KQV9
Domains : Interpro (EBI)Nucleotide-diphossugar_trans    UDPGP_fam   
Domain families : Pfam (Sanger)UDPGP (PF01704)   
Domain families : Pfam (NCBI)pfam01704   
Conserved Domain (NCBI)UAP1L1
DMDM Disease mutations91373
Blocks (Seattle)UAP1L1
SuperfamilyQ3KQV9
Human Protein Atlas [tissue]ENSG00000197355-UAP1L1 [tissue]
Peptide AtlasQ3KQV9
HPRD15596
IPIIPI00477962   IPI00798010   IPI00152748   
Protein Interaction databases
DIP (DOE-UCLA)Q3KQV9
IntAct (EBI)Q3KQV9
FunCoupENSG00000197355
BioGRIDUAP1L1
STRING (EMBL)UAP1L1
ZODIACUAP1L1
Ontologies - Pathways
QuickGOQ3KQV9
Ontology : AmiGOUDP-N-acetylglucosamine diphosphorylase activity  cytosol  UDP-N-acetylglucosamine biosynthetic process  
Ontology : EGO-EBIUDP-N-acetylglucosamine diphosphorylase activity  cytosol  UDP-N-acetylglucosamine biosynthetic process  
Pathways : KEGGAmino sugar and nucleotide sugar metabolism   
NDEx NetworkUAP1L1
Atlas of Cancer Signalling NetworkUAP1L1
Wikipedia pathwaysUAP1L1
Orthology - Evolution
OrthoDB91373
GeneTree (enSembl)ENSG00000197355
Phylogenetic Trees/Animal Genes : TreeFamUAP1L1
HOVERGENQ3KQV9
HOGENOMQ3KQV9
Homologs : HomoloGeneUAP1L1
Homology/Alignments : Family Browser (UCSC)UAP1L1
Gene fusions - Rearrangements
Tumor Fusion PortalUAP1L1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUAP1L1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UAP1L1
dbVarUAP1L1
ClinVarUAP1L1
1000_GenomesUAP1L1 
Exome Variant ServerUAP1L1
ExAC (Exome Aggregation Consortium)ENSG00000197355
GNOMAD BrowserENSG00000197355
Genetic variants : HAPMAP91373
Genomic Variants (DGV)UAP1L1 [DGVbeta]
DECIPHERUAP1L1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUAP1L1 
Mutations
ICGC Data PortalUAP1L1 
TCGA Data PortalUAP1L1 
Broad Tumor PortalUAP1L1
OASIS PortalUAP1L1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUAP1L1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUAP1L1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch UAP1L1
DgiDB (Drug Gene Interaction Database)UAP1L1
DoCM (Curated mutations)UAP1L1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UAP1L1 (select a term)
intoGenUAP1L1
Cancer3DUAP1L1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETUAP1L1
MedgenUAP1L1
Genetic Testing Registry UAP1L1
NextProtQ3KQV9 [Medical]
TSGene91373
GENETestsUAP1L1
Target ValidationUAP1L1
Huge Navigator UAP1L1 [HugePedia]
snp3D : Map Gene to Disease91373
BioCentury BCIQUAP1L1
ClinGenUAP1L1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91373
Chemical/Pharm GKB GenePA134943810
Clinical trialUAP1L1
Miscellaneous
canSAR (ICR)UAP1L1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUAP1L1
EVEXUAP1L1
GoPubMedUAP1L1
iHOPUAP1L1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:20:56 CET 2017

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