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UBASH3B (ubiquitin associated and SH3 domain containing B)

Identity

Alias_symbol (synonym)KIAA1959
STS-1
TULA2
TULA-2
Other aliasSTS1
p70
HGNC (Hugo) UBASH3B
LocusID (NCBI) 84959
Atlas_Id 45606
Location 11q24.1  [Link to chromosome band 11q24]
Location_base_pair Starts at 122655690 and ends at 122814479 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SPRR1B (1q21.3) / UBASH3B (11q24.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Leukemias implicated (Data extracted from papers in the Atlas)

Leukemias TL_t0711p15q24ID3308


External links

Nomenclature
HGNC (Hugo)UBASH3B   29884
Cards
Entrez_Gene (NCBI)UBASH3B  84959  ubiquitin associated and SH3 domain containing B
AliasesSTS-1; STS1; TULA-2; TULA2; 
p70
GeneCards (Weizmann)UBASH3B
Ensembl hg19 (Hinxton)ENSG00000154127 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000154127 [Gene_View]  ENSG00000154127 [Sequence]  chr11:122655690-122814479 [Contig_View]  UBASH3B [Vega]
ICGC DataPortalENSG00000154127
TCGA cBioPortalUBASH3B
AceView (NCBI)UBASH3B
Genatlas (Paris)UBASH3B
WikiGenes84959
SOURCE (Princeton)UBASH3B
Genetics Home Reference (NIH)UBASH3B
Genomic and cartography
GoldenPath hg38 (UCSC)UBASH3B  -     chr11:122655690-122814479 +  11q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UBASH3B  -     11q24.1   [Description]    (hg19-Feb_2009)
GoldenPathUBASH3B - 11q24.1 [CytoView hg19]  UBASH3B - 11q24.1 [CytoView hg38]
ImmunoBaseENSG00000154127
Mapping of homologs : NCBIUBASH3B [Mapview hg19]  UBASH3B [Mapview hg38]
OMIM609201   
Gene and transcription
Genbank (Entrez)AB075839 AF425252 AK075203 AK092011 AK222843
RefSeq transcript (Entrez)NM_001363365 NM_032873
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UBASH3B
Alternative Splicing GalleryENSG00000154127
Gene ExpressionUBASH3B [ NCBI-GEO ]   UBASH3B [ EBI - ARRAY_EXPRESS ]   UBASH3B [ SEEK ]   UBASH3B [ MEM ]
Gene Expression Viewer (FireBrowse)UBASH3B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)84959
GTEX Portal (Tissue expression)UBASH3B
Human Protein AtlasENSG00000154127-UBASH3B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UBASH3B
DMDM Disease mutations84959
Blocks (Seattle)UBASH3B
Human Protein Atlas [tissue]ENSG00000154127-UBASH3B [tissue]
HPRD16463
IPIIPI00154910   
Protein Interaction databases
FunCoupENSG00000154127
BioGRIDUBASH3B
STRING (EMBL)UBASH3B
ZODIACUBASH3B
Ontologies - Pathways
Huge Navigator UBASH3B [HugePedia]
snp3D : Map Gene to Disease84959
BioCentury BCIQUBASH3B
ClinGenUBASH3B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84959
Chemical/Pharm GKB GenePA162407840
Clinical trialUBASH3B
Miscellaneous
canSAR (ICR)UBASH3B (select the gene name)
DataMed IndexUBASH3B
Probes
Litterature
PubMed53 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUBASH3B
EVEXUBASH3B
GoPubMedUBASH3B
iHOPUBASH3B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Feb 19 17:15:09 CET 2020

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