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UBB (ubiquitin B)

Identity

Alias (NCBI)HEL-S-50
HGNC (Hugo) UBB
HGNC Alias symbMGC8385
FLJ25987
HGNC Alias namepolyubiquitin B
LocusID (NCBI) 7314
Atlas_Id 42742
Location 17p11.2  [Link to chromosome band 17p11]
Location_base_pair Starts at 16381091 and ends at 16382740 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DBI (2q14.2)::UBB (17p11.2)DUSP9 (Xq28)::UBB (17p11.2)MRPL23 (11p15.5)::UBB (17p11.2)
TUBA1C (12q13.12)::UBB (17p11.2)UBB (17p11.2)::HERC1 (15q22.31)UBB (17p11.2)::SMARCA4 (19p13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)UBB   12463
Cards
Entrez_Gene (NCBI)UBB    ubiquitin B
AliasesHEL-S-50
GeneCards (Weizmann)UBB
Ensembl hg19 (Hinxton)ENSG00000170315 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000170315 [Gene_View]  ENSG00000170315 [Sequence]  chr17:16381091-16382740 [Contig_View]  UBB [Vega]
ICGC DataPortalENSG00000170315
TCGA cBioPortalUBB
AceView (NCBI)UBB
Genatlas (Paris)UBB
SOURCE (Princeton)UBB
Genetics Home Reference (NIH)UBB
Genomic and cartography
GoldenPath hg38 (UCSC)UBB  -     chr17:16381091-16382740 +  17p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UBB  -     17p11.2   [Description]    (hg19-Feb_2009)
GoldenPathUBB - 17p11.2 [CytoView hg19]  UBB - 17p11.2 [CytoView hg38]
ImmunoBaseENSG00000170315
Genome Data Viewer NCBIUBB [Mapview hg19]  
OMIM191339   
Gene and transcription
Genbank (Entrez)AA659395 AK129498 AK300882 BC000379 BC009301
RefSeq transcript (Entrez)NM_001281716 NM_001281717 NM_001281718 NM_001281719 NM_001281720 NM_018955
Consensus coding sequences : CCDS (NCBI)UBB
Gene ExpressionUBB [ NCBI-GEO ]   UBB [ EBI - ARRAY_EXPRESS ]   UBB [ SEEK ]   UBB [ MEM ]
Gene Expression Viewer (FireBrowse)UBB [ Firebrowse - Broad ]
GenevisibleExpression of UBB in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7314
GTEX Portal (Tissue expression)UBB
Human Protein AtlasENSG00000170315-UBB [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UBB
Human Protein Atlas [tissue]ENSG00000170315-UBB [tissue]
HPRD06771
Protein Interaction databases
BioGRIDUBB
STRING (EMBL)UBB
ZODIACUBB
Ontologies - Pathways
Litterature
PubMed285 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXUBB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Jan 20 13:05:06 CET 2022

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