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UBC (ubiquitin C)

Identity

Alias (NCBI)HMG20
HGNC (Hugo) UBC
HGNC Alias namepolyubiquitin-C
LocusID (NCBI) 7316
Atlas_Id 42743
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 124911646 and ends at 124914650 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AD_1 () / UBC (12q24.31)APBB1 (11p15.4) / UBC (12q24.31)FHIT (3p14.2) / UBC (12q24.31)
HPCAL4 (1p34.2) / UBC (12q24.31)LOC100507412 (-) / UBC (12q24.31)METRNL (17q25.3) / UBC (12q24.31)
PPP4R3B (2p16.1) / UBC (12q24.31)RBM10 (Xp11.23) / UBC (12q24.31)RPL23A (17q11.2) / UBC (12q24.31)
SCARB1 (12q24.31) / UBC (12q24.31)TLE4 (9q21.31) / UBC (12q24.31)UBA52 (19p13.11) / UBC (12q24.31)
UBC (12q24.31) / GNA12 (7p22.3)UBC (12q24.31) / LMNA (1q22)UBC (12q24.31) / MYC (8q24.21)
UBC (12q24.31) / SLC23A2 (20p13)UBC (12q24.31) / UBA52 (19p13.11)UBC (12q24.31) / UBC (12q24.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)UBC   12468
Cards
Entrez_Gene (NCBI)UBC    ubiquitin C
AliasesHMG20
GeneCards (Weizmann)UBC
Ensembl hg19 (Hinxton)ENSG00000150991 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000150991 [Gene_View]  ENSG00000150991 [Sequence]  chr12:124911646-124914650 [Contig_View]  UBC [Vega]
ICGC DataPortalENSG00000150991
TCGA cBioPortalUBC
AceView (NCBI)UBC
Genatlas (Paris)UBC
SOURCE (Princeton)UBC
Genetics Home Reference (NIH)UBC
Genomic and cartography
GoldenPath hg38 (UCSC)UBC  -     chr12:124911646-124914650 -  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UBC  -     12q24.31   [Description]    (hg19-Feb_2009)
GoldenPathUBC - 12q24.31 [CytoView hg19]  UBC - 12q24.31 [CytoView hg38]
ImmunoBaseENSG00000150991
Genome Data Viewer NCBIUBC [Mapview hg19]  
OMIM191340   
Gene and transcription
Genbank (Entrez)AB009010 AB209782 AF052164 AK026846 AK056939
RefSeq transcript (Entrez)NM_021009
Consensus coding sequences : CCDS (NCBI)UBC
Gene ExpressionUBC [ NCBI-GEO ]   UBC [ EBI - ARRAY_EXPRESS ]   UBC [ SEEK ]   UBC [ MEM ]
Gene Expression Viewer (FireBrowse)UBC [ Firebrowse - Broad ]
GenevisibleExpression of UBC in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7316
GTEX Portal (Tissue expression)UBC
Human Protein AtlasENSG00000150991-UBC [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UBC
Human Protein Atlas [tissue]ENSG00000150991-UBC [tissue]
HPRD07038
Protein Interaction databases
BioGRIDUBC
STRING (EMBL)UBC
ZODIACUBC
Ontologies - Pathways
Litterature
PubMed499 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXUBC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:37:05 CEST 2021

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